PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl003970
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family GeBP
Protein Properties Length: 362aa    MW: 41018.8 Da    PI: 8.6953
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55336531PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-29013PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57348.42.7e-15115211297
     DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksg....kepsfskehdqkifelskkiWg 97 
                +f + ws eDe +l  +l+ ++   g   + ++ afye++k+ + f++s++ql +K+rr++ +f +  +k+++g    ++++ +++++   f++ k+iWg
  Pgl003970 115 KFPQTWSAEDETSLANALLVCAGGGG---QVNMAAFYEQAKDALGFDISNTQLYDKMRRMRSRFWTIHSKISEGsvpeDQFAYRSPNEAALFKVWKQIWG 211
                78999****************65555...679***********************************999666511116677899**************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045046.0E-16116211IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MSADRHSNGP FENPNGISVG PNFSSSSLKK NNGVEAKRNR GDRDKDQITP PAAKRTNPSE  60
GNGKKSQSDL EELVAQTYAK GISILHQKHR DDDTRRSKSK KKKKKKAEKS GEQKKFPQTW  120
SAEDETSLAN ALLVCAGGGG QVNMAAFYEQ AKDALGFDIS NTQLYDKMRR MRSRFWTIHS  180
KISEGSVPED QFAYRSPNEA ALFKVWKQIW GINVKDHHEE EDLHNTGQNN WDYFIRDEDH  240
GPNESRAPVV ENMMEEVQSN IEALINNFFR RISAAANLQP FSSGFGAKAG NGSCLCSSLS  300
GRMKELIEGV RSVKEFPWLD EAEARALQQK WHNNRVEELR VFRRSLELLQ EECKLCLKEL  360
EK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194100RRSKSKK
299105KKKKKKK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.56350.0needle| somatic embryo| stem| vegetative bud
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NZ241e-164A9NZ24_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.23e-11DNA-binding storekeeper protein-related transcriptional regulator