PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl003895
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family GeBP
Protein Properties Length: 367aa    MW: 41475.6 Da    PI: 9.3705
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55337039PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-47371PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57348.62.3e-15114209497
     DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsk.sqlveKirrLKkKfkkkvkkaksgk....epsfskehdqkifelskkiWg 97 
                 + ws eDei++   l+ ++ + g   + d+ afye+vk+ i +++++ +ql +K+r ++ +f   ++k k+g+    +++ ++ h+   f++ k+iWg
  Pgl003895 114 PQTWSAEDEISFVNTLLACAGEGG---QVDTAAFYEQVKETIALNITRnTQLYDKMRTMRSRFWSIQSKLKEGNipedQFAYRSLHEAALFKVWKQIWG 209
                578****************77777...67****************98626*******************7776422116678899*************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.5E-17115209IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MSADRHSNGS PENPNEMSAR PNSSHSQKKN NGVEAKRSMR NQGKDQLTPT AAKRSKPSTD  60
SGKKSQNNVE ELVAQTYAKG ISILHQKHKD DDARGSKSKK KKKAGKSSVQ TKIPQTWSAE  120
DEISFVNTLL ACAGEGGQVD TAAFYEQVKE TIALNITRNT QLYDKMRTMR SRFWSIQSKL  180
KEGNIPEDQF AYRSLHEAAL FKVWKQIWGN DVEKRDEEED GDNKDQLPSQ NNGNFVRDEN  240
HRANESRVPV VENMTEEVQS KVETLIDSLI RRISTATNLP PFSPGFGAEI GTGSCLCSNL  300
SRRMKELIEA VRSVKEFPGL GAVEAQVLRQ KWRNHRLEEL RVFCRSLELL QEECALCLQE  360
LEKRKVK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.168120.0stem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NZ240.0A9NZ24_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.29e-10DNA-binding storekeeper protein-related transcriptional regulator