PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl001814
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family GRF
Protein Properties Length: 566aa    MW: 61757.1 Da    PI: 9.3271
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S40975168PU_unrefUnigeneView CDS
gnl|UG|Pgl#S55332477PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-25375PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC79.82.5e-25102145144
        WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                d+epgrCrRtDGKkWRCsr+v++++k+CErH+hrgr+rsrk++e
  Pgl001814 102 DPEPGRCRRTDGKKWRCSRDVVPDQKYCERHMHRGRHRSRKPVE 145
                79***************************************998 PP
2QLQ56.58.7e-203166237
        QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
               +F++aQ+++L++Q+l++Ky++a  PvPpeL+ +i+k
  Pgl001814 31 PFSPAQWEELEHQALIFKYMMACIPVPPELIIPIRK 66
               9*********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009515.5E-123066IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166622.0573166IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088802.1E-143165IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166726.898102146IPR014977WRC domain
PfamPF088798.9E-22103145IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 566 aa     Download sequence    Send to blast
MPVSSMAMGR EFGVMETGMG MHGVRTGVRP PFSPAQWEEL EHQALIFKYM MACIPVPPEL  60
IIPIRKSLHS LPERSPPLPP HHHLSTLTPW SSFHMGFGGN MDPEPGRCRR TDGKKWRCSR  120
DVVPDQKYCE RHMHRGRHRS RKPVEGHTAA VTSQPNSISA PSSLSLAAAV TTSSNVLARP  180
SISVNSLQKL HQPGPLLGTK NLSFTGSGSQ IQQYPLQAAA GAVTSSSPSA MGSKDYRYVN  240
GMKGGEMDEH ILFSEASGSS TITNQWRFTA ASKAAVPYIA QSKTNNNDSL LQYSSSPQLR  300
TLLGQNLGIV TEGNQVAGIH MNPPDKQQQQ RRQQHSFLST DYGRMQEAMR EPEEQPLRHF  360
FDEWPRSRNP WATDVEDETS NRNSSTTQLS ISIPMPSSNF SATNSNSSPR GKLSLTSLKL  420
SMSGDGSDPL GVDPIEMGLA VGMNMSVEDR HRQTQSQHHH HHQANWVPIA WGNPMGIGGP  480
LAEVLQSSTT PSGCNKNKPG LNLTNDIGWK DNMNNSSSSN KNSTSSHSRD SPPSCMQTSS  540
PAERGVAGRM GSAIDHPVPT HKGIGY
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.311770.0vegetative bud
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0M3LBH70.0A0A0M3LBH7_9SPER; Growth regulating factor 3
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37740.14e-44growth-regulating factor 2