PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG033397.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

Dof

Protein Properties

Length: 300aa MW: 34050.9 Da PI: 4.5126

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG033397.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	116.6	1e-36	31	86	6	61
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC s ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rk +++ CCG033397.1 31 PNCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKYRRA 86 68**************************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	7.0E-29	14	85	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.8E-31	31	85	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.183	31	85	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	33	69	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence Send to blast
MYSAGDQMMF QCPPRPLPME RKWKSKIEVA PNCPRCASPN TKFCYYNNYS LSQPRYFCKG 60 CRRYWTKGGS LRNVPVGGGC RKYRRARSSK ILQNERAAVS LDYSRANETL ACSSNKDSVA 120 QQDGANGSDI DLAAVFSKFL NQDLSYGPEF IGEELRDEGS ELVNISNSST PISDSYQNDP 180 MMESLKRSDL AQESNLLEGR SQVLVGEKQQ FEEERFQELM ESQDMNAFGL QNLLIDEIVQ 240 DALWSDDATL PNVPNWQPMV QLQDFDSFSV DDRLKISANF TSDNNWSSFD LSGFEVYPRP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	182	187	ESLKRS

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	CU222746	0.0	CU222746.1 Populus EST from leave.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011027360.1	0.0	PREDICTED: dof zinc finger protein DOF1.2
TrEMBL	A0A2K2BES3	0.0	A0A2K2BES3_POPTR; Uncharacterized protein
STRING	POPTR_0002s07150.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1817	33	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21340.1	1e-41	Dof family protein