PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG023915.1
Common NameDREB4
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 452aa    MW: 50784.5 Da    PI: 5.8434
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG023915.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.6e-1867125155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpseng....kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  ++y+GVr++  +g+WvAeIr+p++ +    ++  r +lg+f ta eAa a++ a+k l+g
  CCG023915.1  67 CRYRGVRQRT-WGKWVAEIREPVNKCslmnRQgSRLWLGTFSTAIEAACAYDYAAKLLYG 125
                  78*****999.**********877556754336***********************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.50E-2767134No hitNo description
PfamPF008472.8E-1167125IPR001471AP2/ERF domain
PROSITE profilePS5103222.44568133IPR001471AP2/ERF domain
SMARTSM003806.7E-3268139IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.9E-2868134IPR001471AP2/ERF domain
SuperFamilySSF541713.66E-1968134IPR016177DNA-binding domain
PRINTSPR003673.0E-96980IPR001471AP2/ERF domain
PRINTSPR003673.0E-999115IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MEDSLRQCSL LGFSSEDRKR RRNGCESIED TLARWKKHNK LQVSKVPGKG SKKGCMKGKG  60
GPENMNCRYR GVRQRTWGKW VAEIREPVNK CSLMNRQGSR LWLGTFSTAI EAACAYDYAA  120
KLLYGPNAIL NFPDYPVESG DHLDNMSSSI TATETSSTES RTALGNYEDN KVDKLKMNHC  180
GSREGNNQSG FSRICAVDES EEEVEKLRVA ESSARELKAV EWNLTDEWKS SHHIEAEAPV  240
LREEMDGELA GILRSWSCYG INNRYGFLQN ETEKVRHKKL KNEVVESRMS TILNECVDSD  300
YDMRTDHKPI YDVEKPLMRE AAAGEEFSGL KFSSYNPFET THDHMNPGLC NQGIDIKPFI  360
QDISHNSVSK GGGNYGYDPR KVGSADHLQN GRPSGLSSQL QTPSTNLPGS LSYFQEADIG  420
LGWNFDPSQQ EFNGGLVGEP GLLDQWYPEL QF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-1669133360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11721RKRRR
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ9197050.0FJ919705.1 Populus euphratica dehydration responsive element binding protein (DREB4) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011019066.10.0PREDICTED: uncharacterized protein LOC105121905 isoform X1
TrEMBLC4PE640.0C4PE64_POPEU; Dehydration responsive element binding protein
STRINGPOPTR_0006s10510.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1711058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38340.13e-21ERF family protein