PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG022996.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bHLH
Protein Properties Length: 246aa    MW: 27535.8 Da    PI: 7.0812
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG022996.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.7e-11130177455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  CCG022996.1 130 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 177
                  8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.41E-18123194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.37E-9124181No hitNo description
PROSITE profilePS5088815.605126176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-18127195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-8130177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-10132182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048446Biological Processpetal morphogenesis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MDPPAMMNEG GPYSLEEIWQ FPINGSGKGH FDLLNLGQRA AASVRKRRDV DLDVDDDSSS  60
KPTTNGLLHC DGKRLKTSGS KDENHHRHLD SKDEAEPSSG KHVEHKTQPP EPPKQDYIHV  120
RERRGKATDS HSLAERARRE KISERMKILQ DLVPGCNKVI GKALVLDEII NYIQSLQRQV  180
EFLSMKLEAV NTRINPGIEV FASKDFGQTF DTAGMAFGSQ ATREYSRGTS PEWLHMQVGG  240
GFERTS
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00207DAPTransfer from AT1G59640Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011008095.11e-172PREDICTED: transcription factor BPE-like isoform X2
RefseqXP_011008096.11e-172PREDICTED: transcription factor BPE-like isoform X3
SwissprotQ69WS37e-74BH094_ORYSJ; Transcription factor BHLH094
TrEMBLU5FXZ61e-158U5FXZ6_POPTR; Uncharacterized protein
STRINGPOPTR_0010s04920.11e-159(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-93BIG PETAL P