PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG019323.2
Common NameDREB3
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 457aa    MW: 51402.2 Da    PI: 4.9868
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG019323.2genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.9e-1970128155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpseng....kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  ++y+GVr++  +g+WvAeIr+p++ g    kr  r +lg+f ta eAa+a++ a+++++g
  CCG019323.2  70 CKYRGVRQRT-WGKWVAEIREPVKKGsvtnKRrIRLWLGTFSTAIEAARAYDYAARAMYG 128
                  79*****999.**********777444666445************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.9E-1270128IPR001471AP2/ERF domain
CDDcd000185.95E-1970137No hitNo description
Gene3DG3DSA:3.30.730.101.9E-2971137IPR001471AP2/ERF domain
SMARTSM003806.9E-3371142IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-1971137IPR016177DNA-binding domain
PROSITE profilePS5103223.32771136IPR001471AP2/ERF domain
PRINTSPR003671.3E-97283IPR001471AP2/ERF domain
PRINTSPR003671.3E-9102118IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    Send to blast
MEDSLRQSSS LGFSSKNKKK WQRRRNGCES IEDTLAKWKK NNKLQITKVP GKGSKKGCMK  60
GKGGPENNSC KYRGVRQRTW GKWVAEIREP VKKGSVTNKR RIRLWLGTFS TAIEAARAYD  120
YAARAMYGPN AILNFPDYSH EPGGQLDSLS SSMTATESKT TLDNYEDNKV ERLKMGYCGS  180
REVNKQSCSS GIYAVNESEE EVEKFQVAES SGRELKAEVW DLTNEWMPSH HVEAEAPVLR  240
GEMDGELAEI VESWGCYGID DKYDFLQNET ENVEYKLKNE IAESRLDNRL RECLYSDHDM  300
RTDRKSFYDA QMPLTAGEEF SGLTVGNSNH FEARHDDIDP GLYNPEIDIK PFVQGIPDSS  360
PLKGERDYGY VHGEVQAASQ LQSGRPPELS CQLQSGRPPE LSCQLQSPGT NLPGSLSLIQ  420
EADLGGGCNF DLSKQDINWG LVGDPELLDP WFPELQY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-1772136360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ9197040.0FJ919704.1 Populus euphratica dehydration responsive element binding protein (DREB3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011046807.10.0PREDICTED: dehydration-responsive element-binding protein 2B
RefseqXP_011046808.10.0PREDICTED: dehydration-responsive element-binding protein 2B
TrEMBLC4PE630.0C4PE63_POPEU; Dehydration responsive element binding protein
STRINGPOPTR_0016s13380.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1711058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38340.13e-22ERF family protein