PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG012114.2
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 865aa    MW: 96641.5 Da    PI: 7.0378
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG012114.2genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.53.7e-10206253552
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                  kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  ++  l
  CCG012114.2 206 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAYL 253
                  8999*********************************88877666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-14202266IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.726204256IPR004827Basic-leucine zipper domain
PfamPF001701.0E-8206253IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.64E-11206260No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-12206257No hitNo description
CDDcd147032.38E-22207257No hitNo description
PROSITE patternPS000360209224IPR004827Basic-leucine zipper domain
SMARTSM000531.2E-48276507IPR001401Dynamin, GTPase domain
SuperFamilySSF525401.14E-54277565IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3003.1E-76278565IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS5171851.171295556IPR030381Dynamin-type guanine nucleotide-binding (G) domain
CDDcd087711.42E-85296556No hitNo description
PRINTSPR001953.8E-34298316IPR022812Dynamin superfamily
PfamPF003506.5E-40301475IPR022812Dynamin superfamily
PRINTSPR001953.8E-34322339IPR022812Dynamin superfamily
PRINTSPR001953.8E-34394411IPR022812Dynamin superfamily
PRINTSPR001953.8E-34444462IPR022812Dynamin superfamily
PRINTSPR001953.8E-34463479IPR022812Dynamin superfamily
PfamPF010314.6E-39489680IPR000375Dynamin central domain
SMARTSM003021.7E-6759856IPR003130Dynamin GTPase effector
PfamPF022125.3E-12766855IPR003130Dynamin GTPase effector
PROSITE profilePS5138818.767767861IPR020850GTPase effector domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003924Molecular FunctionGTPase activity
GO:0005525Molecular FunctionGTP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 865 aa     Download sequence    Send to blast
MAQLPPKIPN NMTPSWPDFS HKKSPSICIM GTSPPHDANV VIPTATANTT ATVSSQNPSW  60
VDEFLDFSLT RRGTHRRSVS DSIAFLEEAP TMLEECRSTG APGLGSRHNS SSDFDRFDDE  120
QFMSMFNDDI SNAVAAPNSS STPSSPSDHN SINDEKEATL SERQQQQKVR NENDEGQSLS  180
EWETPSTVAS ATNPATTSNE KKIDPKRVKR ILANRQSAQR SRVRKLQYIS ELERSVTSLQ  240
AEVSVLSPRV AYLDHQRLLL NVDNSALKQR IAALSQDKIF KDVDRLRQLN VMKEGIQLPT  300
IVVVGDQSSG KSSVLESLAC INLPRGDGIC TRVPLIVRLK HHPSLVPEIF LQFNDQTVPT  360
DEAHVSDAIK RATDEIAGNG KGISNTELTL VVKKNGVPDL TLVDLPGITR VPVHGQPENV  420
YEQIANIIMK YISPDESVIL NVLSASVDFS TCESIMMSQK VDKNGERTIA VVTKVDKTPE  480
GLLEKVTRND VTIGLGYVCV RNRIGNESYE DARKEEAALF ATHQLLSKIE KSTVGIQVLA  540
KKLVRIQANI IAKCLPDIVR KINEKLKASI SELNRIPRRL LSVAEVMAAF MGIIGSSKES  600
LRKILVRGET DEHPDEKNMH CAARLVEMLD QFSNELHNCS DHTKNFMMNE IEVLEETKGI  660
KLPNFLPQTA FRTIMQRQLS TRRAGHNLVA KMKEQSINWV TEIVLMEKET DYTCNPEYMK  720
EWNKLMAQQH TVIDNITKFG SSKVVIDGSR EVVVGDLRRY KHVLLQAFDL KMRLIAYWKI  780
VLMRLVDNMA LHLQLSIRNL VNKEMEKEIV NELLGTGGGV AIEKLFVESP SVASKRQKLN  840
TSIKLLRESQ EVMANIMDEI ATEGD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3zys_B3e-5028367956462INTERFERON-INDUCED GTP-BINDING PROTEIN MX1
3zys_E3e-5028367956462INTERFERON-INDUCED GTP-BINDING PROTEIN MX1
5gtm_A3e-5028367924430Interferon-induced GTP-binding protein Mx1
5gtm_B3e-5028367924430Interferon-induced GTP-binding protein Mx1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative microtubule-associated force-producing protein, able to bind and hydrolyze GTP. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006376414.10.0dynamin-related protein 4C
SwissprotQ9ZP550.0DRP4C_ARATH; Dynamin-related protein 4C
TrEMBLA0A2K1Y4S30.0A0A2K1Y4S3_POPTR; Uncharacterized protein
STRINGPOPTR_0013s12830.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.13e-81bZIP family protein
Publications ? help Back to Top
  1. Hong Z, et al.
    A unified nomenclature for Arabidopsis dynamin-related large GTPases based on homology and possible functions.
    Plant Mol. Biol., 2003. 53(3): p. 261-5
    [PMID:14750516]
  2. Miyagishima SY,Kuwayama H,Urushihara H,Nakanishi H
    Evolutionary linkage between eukaryotic cytokinesis and chloroplast division by dynamin proteins.
    Proc. Natl. Acad. Sci. U.S.A., 2008. 105(39): p. 15202-7
    [PMID:18809930]