PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG008969.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bZIP

Protein Properties

Length: 408aa MW: 43996.3 Da PI: 9.7604

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG008969.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.8	3.2e-15	330	382	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+ eN++L+k+ e+ ++ + CCG008969.1 330 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKVENEELQKKQAEMMEMQK 382 79***************************************998888777755 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.4E-14	326	390	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.116	328	379	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.6E-13	330	382	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.5E-15	330	379	No hit	No description
SuperFamily	SSF57959	3.06E-11	330	380	No hit	No description
CDD	cd14707	2.62E-27	330	384	No hit	No description
PROSITE pattern	PS00036	0	333	348	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence Send to blast
MGTNFNFKSF TNDQSDAGVG RPPGNFPLAS QSSIYSLTLE ELQNTMGGSL GKDFGSMNMD 60 ELLKSIWSAE ETQTVASATS AEVQDGVGLQ RQGSLTLPRT LSLKTVDEVW KDMSKEYAIN 120 GTSAGVANNV PQRQPTLGEI TLEEFLARAG VVWEDIPVAA KVNTNGGFFG DLSRLANNSS 180 TIGFQQNSGV GLNNNNTTQI SLQSSNLPLN GNGFRSNQAQ VQQQQQQQQI FPKQPNMGYM 240 TQMPPQSSPG IRGGIVGIGD QGINSNLMQG GGMGVVGLGV ATGSPANQLS SDGIGKSNGD 300 TSSVSPVPYV FSGSGRGRRA GGAVEKVVER RQRRMIKNRE SAARSRARKQ AYTMELEAEV 360 AKLKVENEEL QKKQAEMMEM QKNQVMEMMT LQQGGKRRCL RRTQTGPW

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence Send to blast

MGTNFNFKSF TNDQSDAGVG RPPGNFPLAS QSSIYSLTLE ELQNTMGGSL GKDFGSMNMD  60
ELLKSIWSAE ETQTVASATS AEVQDGVGLQ RQGSLTLPRT LSLKTVDEVW KDMSKEYAIN  120
GTSAGVANNV PQRQPTLGEI TLEEFLARAG VVWEDIPVAA KVNTNGGFFG DLSRLANNSS  180
TIGFQQNSGV GLNNNNTTQI SLQSSNLPLN GNGFRSNQAQ VQQQQQQQQI FPKQPNMGYM  240
TQMPPQSSPG IRGGIVGIGD QGINSNLMQG GGMGVVGLGV ATGSPANQLS SDGIGKSNGD  300
TSSVSPVPYV FSGSGRGRRA GGAVEKVVER RQRRMIKNRE SAARSRARKQ AYTMELEAEV  360
AKLKVENEEL QKKQAEMMEM QKNQVMEMMT LQQGGKRRCL RRTQTGPW

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	DQ487100	0.0	DQ487100.1 Populus suaveolens abscisic acid responsive element-binding protein 2 (ABF2) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011014474.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Swissprot	Q9M7Q4	1e-126	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	U5FRA9	0.0	U5FRA9_POPTR; Uncharacterized protein
STRING	POPTR_0014s02810.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1962	34	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-119	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]