PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG006180.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

VOZ

Protein Properties

Length: 503aa MW: 55791.6 Da PI: 5.524

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG006180.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	429.9	3.7e-132	223	440	1	217
VOZ 1 pppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfd 97 pppsaflgp calwdc+rpaqg ew++dycssfh +la+ eg+pg++pvlrp+gi+lkdgllfaalsak++gk vgipecegaatakspwna+elfd CCG006180.1 223 PPPSAFLGPTCALWDCPRPAQGgLEWFRDYCSSFHHSLAFSEGPPGMSPVLRPGGIGLKDGLLFAALSAKAEGKGVGIPECEGAATAKSPWNAPELFD 320 89****************9648********************************************************************** PP VOZ 98 lsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekks 195 ls+legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkq+m+efgglkrsyymdpqp+++fewhlyeyein++da+alyrlelk vd+kks CCG006180.1 321 LSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESRKQIMNEFGGLKRSYYMDPQPLNNFEWHLYEYEINKCDACALYRLELKAVDGKKS 418 ********************************************************************************************** PP VOZ 196 akgkvskdsladlqkklgrlta 217 akgk++++s+adlqk++grlta CCG006180.1 419 AKGKIANESVADLQKQMGRLTA 440 ******************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence Send to blast
MAIMGFVESK GSATVMGKGS KINCKSASHK LFKDKAKNRV DDLQGMFLDL QFARKESRTV 60 DVAVLEEQVH QMLREWKAEL NEPSPASSLQ QGGSLGSFST DICRLLQLCE EEDDATSALA 120 APKLEPNDQS MQGGDNVVFQ EEYAVNHGQQ EHAFPFVDQC KDSLSGVRSL AINNIEGAAQ 180 LDYHQFDLPQ SFEQNFYASF NGTDLGEEDG MHHVSSYLPS MCPPPSAFLG PTCALWDCPR 240 PAQGGLEWFR DYCSSFHHSL AFSEGPPGMS PVLRPGGIGL KDGLLFAALS AKAEGKGVGI 300 PECEGAATAK SPWNAPELFD LSVLEGETIR EWLFFDKPRR AFESGNRKQR SLPDYTGRGW 360 HESRKQIMNE FGGLKRSYYM DPQPLNNFEW HLYEYEINKC DACALYRLEL KAVDGKKSAK 420 GKIANESVAD LQKQMGRLTA EFPPDNKRAV KGRTKVNAKV GNVYSGSTQV APSNEAYDYG 480 PGSQYDYLVE NLKGYYLTQF KKP

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence Send to blast

MAIMGFVESK GSATVMGKGS KINCKSASHK LFKDKAKNRV DDLQGMFLDL QFARKESRTV  60
DVAVLEEQVH QMLREWKAEL NEPSPASSLQ QGGSLGSFST DICRLLQLCE EEDDATSALA  120
APKLEPNDQS MQGGDNVVFQ EEYAVNHGQQ EHAFPFVDQC KDSLSGVRSL AINNIEGAAQ  180
LDYHQFDLPQ SFEQNFYASF NGTDLGEEDG MHHVSSYLPS MCPPPSAFLG PTCALWDCPR  240
PAQGGLEWFR DYCSSFHHSL AFSEGPPGMS PVLRPGGIGL KDGLLFAALS AKAEGKGVGI  300
PECEGAATAK SPWNAPELFD LSVLEGETIR EWLFFDKPRR AFESGNRKQR SLPDYTGRGW  360
HESRKQIMNE FGGLKRSYYM DPQPLNNFEW HLYEYEINKC DACALYRLEL KAVDGKKSAK  420
GKIANESVAD LQKQMGRLTA EFPPDNKRAV KGRTKVNAKV GNVYSGSTQV APSNEAYDYG  480
PGSQYDYLVE NLKGYYLTQF KKP

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011027748.1	0.0	PREDICTED: transcription factor VOZ1
Refseq	XP_011027749.1	0.0	PREDICTED: transcription factor VOZ1
Refseq	XP_011027752.1	0.0	PREDICTED: transcription factor VOZ1
Refseq	XP_011027753.1	0.0	PREDICTED: transcription factor VOZ1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	B9H2N9	0.0	B9H2N9_POPTR; Uncharacterized protein
STRING	POPTR_0004s05030.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]