PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_40790

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

BBR-BPC

Protein Properties

Length: 148aa MW: 16483.5 Da PI: 10.1194

Description

BBR-BPC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_40790	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GAGA_bind	154.7	1.6e-47	9	147	159	300
GAGA_bind 159 pkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiag 257 + +++ ++ +++ ++s++++++++ ++ ++ek+ + + g s D s++P+PvCsCtG+ r C k+ +GGW S+CCt ++S yPLP ++ r+ Ri g PEQU_40790 9 TNVPTPNESENQASASRNNNEAST--STENREKNREESIVHGGSTDFSRVPIPVCSCTGVRRECHKF-AGGWRSTCCTASLSEYPLPFTSSRPKKRIMG 104 333333333333333433333333..45666777777789999*********************9.7************************** PP GAGA_bind 258 rKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvti 300 r + ++a+kk+Le+LaaeG+dl vDLk+hWA+ G n++ i PEQU_40790 105 RSITKAAYKKILERLAAEGHDLLWGVDLKNHWARAGANQHKRI 147 ************************************98665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01226	1.6E-8	1	148	IPR010409	GAGA-binding transcriptional activator
Pfam	PF06217	5.0E-44	8	147	IPR010409	GAGA-binding transcriptional activator

Sequence ? help Back to Top
Protein Sequence Length: 148 aa Download sequence Send to blast
MNKEKEAATN VPTPNESENQ ASASRNNNEA STSTENREKN REESIVHGGS TDFSRVPIPV 60 CSCTGVRREC HKFAGGWRST CCTASLSEYP LPFTSSRPKK RIMGRSITKA AYKKILERLA 120 AEGHDLLWGV DLKNHWARAG ANQHKRIK

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. {ECO:0000269\|PubMed:14731261}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020598248.1	1e-100	protein BASIC PENTACYSTEINE7-like, partial
Swissprot	O82286	9e-36	BPC7_ARATH; Protein BASIC PENTACYSTEINE7
TrEMBL	A0A2H3XTM7	5e-44	A0A2H3XTM7_PHODC; protein BASIC PENTACYSTEINE7 isoform X2
STRING	XP_008788595.1	3e-44	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP20777	6	7

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35550.4	4e-38	basic pentacysteine 7