PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_39198
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family NAC
Protein Properties Length: 390aa    MW: 44603.7 Da    PI: 4.5713
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_39198genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.18.9e-5091411128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 
                 lp GfrFhPtdeelv++yLk k++g+ ++ ++vi+e+d++k+ePwdLp k  ++++++ew+fF++ d+ky++g r+nrat +gyWkatgkd+ + s+  
  PEQU_39198   9 LPLGFRFHPTDEELVNHYLKGKITGRLHSDTQVIPEIDVCKCEPWDLPdKsLIRSDDHEWFFFAPIDRKYPNGYRSNRATGAGYWKATGKDRVIRSRaa 107
                 699************************99999***************96447778999*************************************9744 PP

         NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++g+kktLvf++grapkg +t W+mheyr 
  PEQU_39198 108 pLPGVIGMKKTLVFHRGRAPKGLRTCWIMHEYRT 141
                 43345***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-564162IPR003441NAC domain
PROSITE profilePS5100554.3459162IPR003441NAC domain
PfamPF023656.7E-2610140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0071470Biological Processcellular response to osmotic stress
GO:1900426Biological Processpositive regulation of defense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MTVVPLESLP LGFRFHPTDE ELVNHYLKGK ITGRLHSDTQ VIPEIDVCKC EPWDLPDKSL  60
IRSDDHEWFF FAPIDRKYPN GYRSNRATGA GYWKATGKDR VIRSRAAPLP GVIGMKKTLV  120
FHRGRAPKGL RTCWIMHEYR TTEQEFECGE QGGYMLYRLF KKPEEKSLNF NDDEMVNGGY  180
SQTNSKLSPA DIQQLTSEEP EDNLEQTSTE LVLCGERSSQ SLNQTIKEQS ATKLKWLSEK  240
IDCLRDSTVG QEDGHCNALT TFNEANNNAE ATGATIDPLI NVLEQFCDPF EEQTVDQSFP  300
NDTDWPVYNI GYEPDHIEEV LNTMLARQDK YGEDDAQHKF TAEFQSICRK EDSQDFARES  360
FLSSEVYNSM LALQQVVNMS SNIDFLPKYL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A9e-44816219168NAC domain-containing protein 19
3swm_B9e-44816219168NAC domain-containing protein 19
3swm_C9e-44816219168NAC domain-containing protein 19
3swm_D9e-44816219168NAC domain-containing protein 19
3swp_A9e-44816219168NAC domain-containing protein 19
3swp_B9e-44816219168NAC domain-containing protein 19
3swp_C9e-44816219168NAC domain-containing protein 19
3swp_D9e-44816219168NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:18443413, PubMed:24329768). Calmodulin-regulated transcriptional repressor. Binds several synthetic promoters with randomly selected binding sites (PubMed:17947243). Functions synergistically with SNI1 as negative regulator of pathogen-induced PR1 expression and basal resistance to a virulent strain of P.syringae. Binds directly to the promoter of the PR1 gene (PubMed:22826500). Acts as positive regulator of innate immunity. Involved in the effector-triggered immunity (ETI) induction of immunity-related gene expression (PubMed:24329768). Mediates osmotic stress signaling in leaf senescence by up-regulating senescence-associated genes (PubMed:18443413). {ECO:0000269|PubMed:17947243, ECO:0000269|PubMed:18443413, ECO:0000269|PubMed:22826500, ECO:0000269|PubMed:24329768}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00108PBMTransfer from AT4G35580Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020596084.10.0NAC domain-containing protein 14-like
SwissprotF4JN355e-73NTL9_ARATH; Protein NTM1-like 9
TrEMBLA0A2H3XUF41e-105A0A2H3XUF4_PHODC; protein NTM1-like 9 isoform X1
STRINGXP_008788721.11e-106(Phoenix dactylifera)
STRINGXP_008811393.11e-108(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51723859
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.14e-75NAC transcription factor-like 9
Publications ? help Back to Top
  1. Zheng XY, et al.
    Spatial and temporal regulation of biosynthesis of the plant immune signal salicylic acid.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(30): p. 9166-73
    [PMID:26139525]
  2. Guo T, et al.
    Lamin-like Proteins Negatively Regulate Plant Immunity through NAC WITH TRANSMEMBRANE MOTIF1-LIKE9 and NONEXPRESSOR OF PR GENES1 in Arabidopsis thaliana.
    Mol Plant, 2017. 10(10): p. 1334-1348
    [PMID:28943325]