PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_31322 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | bHLH | ||||||||
Protein Properties | Length: 100aa MW: 11278.8 Da PI: 9.9478 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35 | 2.5e-11 | 34 | 82 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PEQU_31322 34 NSHSLAERVRREKISERMRILQDLVPGC----NKITGKAVMLDEIINYVQSLQ 82 58**************************....999*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.09E-16 | 29 | 89 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.91E-10 | 29 | 86 | No hit | No description |
PROSITE profile | PS50888 | 15.434 | 31 | 81 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.2E-16 | 32 | 86 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.1E-8 | 34 | 82 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.8E-10 | 37 | 87 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence Send to blast |
GKLAVKQAKE VSQDGDDSKE AFIHVRAKRG KATNSHSLAE RVRREKISER MRILQDLVPG 60 CNKITGKAVM LDEIINYVQS LQQQVEVGSL NDNIFKHYNS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif. Binds to chromatin DNA of the FT gene and promotes its expression, and thus triggers flowering in response to blue light (PubMed:24130508). {ECO:0000269|PubMed:23161888, ECO:0000269|PubMed:24130508}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020573315.1 | 2e-55 | transcription factor bHLH74-like isoform X1 | ||||
Refseq | XP_020573317.1 | 2e-55 | transcription factor bHLH74-like isoform X2 | ||||
Refseq | XP_020595306.1 | 3e-55 | transcription factor bHLH74-like isoform X1 | ||||
Refseq | XP_020595307.1 | 2e-55 | transcription factor bHLH74-like isoform X2 | ||||
Swissprot | Q6NKN9 | 9e-40 | BH074_ARATH; Transcription factor bHLH74 | ||||
TrEMBL | A0A2I0WYS2 | 2e-48 | A0A2I0WYS2_9ASPA; Transcription factor bHLH74 | ||||
STRING | XP_008785728.1 | 2e-44 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6033 | 36 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10120.1 | 4e-42 | bHLH family protein |
Publications ? help Back to Top | |||
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