PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_31285 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | Trihelix | ||||||||
Protein Properties | Length: 318aa MW: 35775.3 Da PI: 6.09 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 71.8 | 1.2e-22 | 94 | 189 | 1 | 85 |
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +Wt++ v++Li ++ +++++ ++ +kk++W+ vsk ++++g+ +sp+qC++k+++lnkrykk++e+ +++ t++++++ +++d++ PEQU_31285 94 KWTDDVVRLLISLVASIDDDAGSMDtagrkqstamQKKGKWKMVSKLLMQKGCYVSPQQCEDKFNDLNKRYKKLNEILGRGtTCQVVENPSLLDSM 189 7**************66666664322334445666**********************************************77*********9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 1.4E-19 | 92 | 216 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence Send to blast |
MNHQIGGGGG LFARHXXXXX XXXXXXXXXX XXXXXVFRSL EPSARHHLSP PPTQPMSLFS 60 DDEEAAIEGG GGEDSPNHDS LHRSKKGSPW QRMKWTDDVV RLLISLVASI DDDAGSMDTA 120 GRKQSTAMQK KGKWKMVSKL LMQKGCYVSP QQCEDKFNDL NKRYKKLNEI LGRGTTCQVV 180 ENPSLLDSMP HVSQNAKDDV RRILSSKHLF YREMCAYHNG QRVIEPKVGF LKCGDAHEVE 240 EGDGENDEEN EGDDEDVGCG SHDFGKAGYD ELCAEIDRVV QDSTKTLCER RVWIRKRILQ 300 LQQXXXXXXX GGEGEHTI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020571630.1 | 0.0 | uncharacterized protein LOC110018609 | ||||
TrEMBL | A0A2I0WBL5 | 1e-152 | A0A2I0WBL5_9ASPA; Uncharacterized protein | ||||
STRING | XP_010246931.1 | 2e-77 | (Nelumbo nucifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP19470 | 5 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21200.1 | 8e-61 | sequence-specific DNA binding transcription factors |