PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_30601

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bHLH

Protein Properties

Length: 274aa MW: 31024.4 Da PI: 9.0053

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_30601	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.5	1.3e-09	118	164	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54 +h+ +Er RR+ri ++ L++l+P + +K Ka iLe+ ++Y++sL PEQU_30601 118 SHSLAERVRRERISLRMKVLQDLVPGC-----EKvTGKALILEEIINYVQSL 164 8***********************9.....6769************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	3.79E-16	112	182	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	3.24E-11	112	169	No hit	No description
PROSITE profile	PS50888	15.535	114	164	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	9.8E-16	114	176	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	9.5E-7	118	164	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.5E-9	120	170	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence Send to blast
MIRASFHLWT MCTFWTLLHT FLRTCRRNQR SHATSSACHP LTLTSTFSSV SSLMETFTSS 60 MVKSEDLQSK KGKQSNVKSK SKRKRTKKSC SEKKLMEETK PVTDYIHVRA RRGQATDSHS 120 LAERVRRERI SLRMKVLQDL VPGCEKVTGK ALILEEIINY VQSLKNQVES LSMKLAFVNP 180 ILYEFGLNFD DFTGTTEHLD SNPQLVSSMI QFSNIQSTAD SIMVMDTSST SVLCGQGPTA 240 FPQDAGSYFL QVDGQTEALD HQVDLYSMSY FQQN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020592327.1	1e-164	transcription factor bHLH137
TrEMBL	A0A2I0WFQ9	1e-92	A0A2I0WFQ9_9ASPA; Transcription factor bHLH77
STRING	Pavir.Ba01554.1.p	4e-56	(Panicum virgatum)
STRING	Pavir.J05063.1.p	4e-56	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2358	37	91

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	6e-45	bHLH family protein