PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_27468 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | GeBP | ||||||||
Protein Properties | Length: 97aa MW: 11392.3 Da PI: 11.3676 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 67 | 4.2e-21 | 2 | 88 | 14 | 97 |
DUF573 14 vlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +LqG+++f++k+g+ +++ ++ f++ + +++f+++k+q+ eK rrLKkK+++ k+ s ++++++ d+ ++++s+kiW PEQU_27468 2 KVLQGILEFTSKRGMthaNYQRNTGPFFNEILPQLQFDFNKNQIAEKQRRLKKKYRNAAVKMGSSPGFVLKSPYDRATYKISRKIWS 88 68************98866677***************************************8888889999***************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 2.2E-20 | 2 | 88 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence Send to blast |
MKVLQGILEF TSKRGMTHAN YQRNTGPFFN EILPQLQFDF NKNQIAEKQR RLKKKYRNAA 60 VKMGSSPGFV LKSPYDRATY KISRKIWSTT FFRLGLL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020590480.1 | 3e-48 | probable transcription factor At3g04930 | ||||
TrEMBL | A0A2I0WQY5 | 2e-46 | A0A2I0WQY5_9ASPA; Mediator-associated protein 1 | ||||
STRING | XP_008807916.1 | 2e-35 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP974 | 37 | 123 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 7e-24 | DNA-binding storekeeper protein-related transcriptional regulator |