PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_26735
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Dof
Protein Properties Length: 172aa    MW: 18878.7 Da    PI: 7.2719
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_26735genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.63.2e-391777262
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                +e++l+cprC+stntkfCy+nny+lsqPr+fCk CrryWt+GGalrnvP+Ggg+r+n k+s
  PEQU_26735 17 PEQNLQCPRCESTNTKFCYFNNYNLSQPRHFCKDCRRYWTRGGALRNVPIGGGTRRNSKRS 77
                68999****************************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-251675IPR003851Zinc finger, Dof-type
PfamPF027019.5E-331975IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.052175IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102359IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
TMQSTTASSP KPPFSDPEQN LQCPRCESTN TKFCYFNNYN LSQPRHFCKD CRRYWTRGGA  60
LRNVPIGGGT RRNSKRSSAS TATAGVANTK RPSQSSTSGE AQRPDLFHVP FLPVDDEDHR  120
MLDMTGSFSS LLSSANDFGN FLDGEEATPA DSSSWCGGCP DLTIYTPDTR FG
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00199DAPTransfer from AT1G51700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020594085.11e-125dof zinc finger protein DOF3.1-like
SwissprotO821557e-37DOF17_ARATH; Dof zinc finger protein DOF1.7
TrEMBLA0A2I0WYY21e-81A0A2I0WYY2_9ASPA; Dof zinc finger protein DOF1.7
STRINGXP_008797869.11e-50(Phoenix dactylifera)
STRINGXP_008806550.11e-50(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP14037367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.13e-39DOF zinc finger protein 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]