PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_26158

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

G2-like

Protein Properties

Length: 265aa MW: 28591.7 Da PI: 6.1751

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_26158	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	48.8	1.5e-15	1	29	27	55
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk +l++m+v+gLt++hvkSHLQkYRl PEQU_26158 1 ATPKGVLRVMGVPGLTIYHVKSHLQKYRL 29 9***************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.2E-14	1	30	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.2E-10	1	30	IPR006447	Myb domain, plants
SuperFamily	SSF46689	7.35E-6	1	29	IPR009057	Homeodomain-like
Pfam	PF14379	1.1E-20	61	108	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence Send to blast
ATPKGVLRVM GVPGLTIYHV KSHLQKYRLA KYIPDSSSDG LKDESKEPGD LLSGLDSSSG 60 VQITEALKLQ MEVQKRLHEQ LEASQRQLQL RIEAQGKYLK KIMEEQQRLN GVLAETPGVN 120 LPPPPSSADF CLDSNPSTPA PICESLHKDK IPNGKHGNAD RLIKSTSLDD SSRQEPLTPD 180 SSFHVDGSTS ESVKHERPNK RLRCNGGGMH GAGNVDLVLG NHILESSSGS EFQQQCSMFN 240 AGSHFDSSGG SFGDDDQFGN GSGSD

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020583323.1	0.0	myb family transcription factor PHL7-like
Swissprot	Q9SJW0	8e-77	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A2I0WUC7	1e-166	A0A2I0WUC7_9ASPA; Protein PHR1-LIKE 1
STRING	XP_008794707.1	1e-107	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2220	38	96

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-69	G2-like family protein