PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_24486

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

G2-like

Protein Properties

Length: 277aa MW: 30512.3 Da PI: 8.0701

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_24486	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.5	7.1e-34	47	101	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl PEQU_24486 47 RQRLRWTNELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 101 58****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.559	44	104	IPR017930	Myb domain
SuperFamily	SSF46689	5.73E-18	46	101	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	2.4E-32	46	102	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.0E-26	48	102	IPR006447	Myb domain, plants
Pfam	PF00249	1.1E-9	49	100	IPR001005	SANT/Myb domain
Pfam	PF14379	1.9E-23	133	179	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence Send to blast
MYQPSLSNIS LANYPSLAHD QPVEMNSTAM SPHAAGNNPN NPSSASRQRL RWTNELHERF 60 VDAVAQLGGP DRATPKGVLR VMGVQGLTIY HVKSHLQKYR LAKYLPDSSA EGAKVEKKES 120 DDVLSNLESS TGMQITEALK LQMEVQKRLH EQLEVQRQLQ LRIEAQGKYL KKIMEEQQRL 180 SGGLAPTSTN QTLEDKSDPS TPVPVTKSSL HGSLFKSFSF EDSHHGPLTP ETGSPSGSPK 240 HERSVKMQGD RDSPKQELML GHHILESSSS LFLGGGL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	2e-24	47	104	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-24	47	104	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-24	47	104	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-24	47	104	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
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Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00252	DAP	Transfer from AT2G01060	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020588294.1	0.0	myb family transcription factor PHL7-like
Refseq	XP_020588295.1	0.0	myb family transcription factor PHL7-like
Swissprot	Q9SJW0	1e-94	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A2I0WSM7	1e-169	A0A2I0WSM7_9ASPA; Protein PHR1-LIKE 1
STRING	XP_008782978.1	1e-117	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2220	38	96

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	7e-78	G2-like family protein