PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_23339
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 349aa    MW: 38769.4 Da    PI: 6.907
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_23339genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.79e-05426123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C+ C+++F ++ +L  H+r+H
  PEQU_23339  4 HSCKVCKRTFANSRSLGGHMRSH 26
                79********************9 PP
2zf-C2H211.80.00073205227123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C +C+ksF++   L  H ++H
  PEQU_23339 205 YECLICSKSFPSYQALGGHCSSH 227
                 99************999999988 PP
3zf-C2H2171.6e-05253275123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+Cp+C+k+F++   L  H r+H
  PEQU_23339 253 YVCPICNKVFPSGQALGGHKRSH 275
                 9*******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.0089426IPR015880Zinc finger, C2H2-like
PfamPF139126.5E-5426IPR007087Zinc finger, C2H2
SuperFamilySSF576671.38E-7426No hitNo description
Gene3DG3DSA:3.30.160.603.4E-4426IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015710.284431IPR007087Zinc finger, C2H2
PROSITE patternPS000280626IPR007087Zinc finger, C2H2
SuperFamilySSF576671.38E-7200227No hitNo description
SuperFamilySSF576671.69E-5203215No hitNo description
SMARTSM003550.082205227IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.515205232IPR007087Zinc finger, C2H2
PfamPF139121.1E-9205229IPR007087Zinc finger, C2H2
PROSITE patternPS000280207227IPR007087Zinc finger, C2H2
SuperFamilySSF576671.69E-5244275No hitNo description
SMARTSM003550.0025253275IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.118253275IPR007087Zinc finger, C2H2
PfamPF139125.9E-13253276IPR007087Zinc finger, C2H2
PROSITE patternPS000280255275IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MEAHSCKVCK RTFANSRSLG GHMRSHFLLK RSFNLEKSSE GRYGLRKKPK ISQWFGDEDT  60
EQGEKESWST RVDDGQEEEM DMQTECQVPR NKRQGRRSKL IEALLDSSSS PEPTSPEFGA  120
LCLMLLSRGE SSVAEEKEIK ISESDIFRIG IKKADFIPSE SGFRLEENGV EFTKDVNFAA  180
VPESRKRKKS TKRDFDTEIE KRSKYECLIC SKSFPSYQAL GGHCSSHKKI RAESSSAVAA  240
VSVQLISQKV GGYVCPICNK VFPSGQALGG HKRSHLIAGN SAASAAAIST EVTCIEQKNS  300
KLNSLDLNLP ASDFEFCDSF DSNGSIAEEK PTSFQENADL EHSRYEAEC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184188RKRKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020583865.10.0zinc finger protein ZAT1-like
TrEMBLA0A2I0WGZ51e-140A0A2I0WGZ5_9ASPA; Zinc finger protein ZAT1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38613573
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02030.18e-17C2H2-like zinc finger protein