PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_22788
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 124aa    MW: 15294.8 Da    PI: 9.4769
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_22788genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.55.3e-071354346
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      WT+eEde l  +v+  G  +W+   r +   R++  c+ rw+ 
       PEQU_22788 13 QWTPEEDEVLRMYVAANGEYDWRGTERLLK--RSRMGCRQRWRY 54
                     7*****************99****888887..66666*****96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.557160IPR017930Myb domain
SuperFamilySSF466891.08E-12989IPR009057Homeodomain-like
SMARTSM007170.00111058IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.5E-141389IPR009057Homeodomain-like
CDDcd001671.47E-51456No hitNo description
PfamPF139212.3E-101470No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MSERRRLSRR MKQWTPEEDE VLRMYVAANG EYDWRGTERL LKRSRMGCRQ RWRYNLRSTV  60
TQHPLTDEEK TVIWQLYENL GARFDTIRRR VSLLFINLEQ ILPIIYYLIC LCFFGFICFQ  120
LIYD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020589689.13e-60transcription factor MYB11-like isoform X1
RefseqXP_020591634.13e-60transcription factor MYB11-like isoform X1
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.14e-13myb domain protein 17