PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_22603 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | WRKY | ||||||||
Protein Properties | Length: 167aa MW: 18932.6 Da PI: 4.124 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 83.4 | 2.2e-26 | 1 | 60 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 dDg++WrKYGqK++ ++++prsY+rCt++ gC++ k+v+rs++d ++++itY g+H++ PEQU_22603 1 DDGHTWRKYGQKDIFSAKYPRSYFRCTHKfdqGCKASKQVQRSEDDDSLFVITYFGDHTC 60 7***************************9999**************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.5E-25 | 1 | 63 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.8E-35 | 1 | 62 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 22.159 | 1 | 63 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.8E-25 | 1 | 60 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 9.29E-24 | 1 | 61 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
DDGHTWRKYG QKDIFSAKYP RSYFRCTHKF DQGCKASKQV QRSEDDDSLF VITYFGDHTC 60 VDPSKAMIPP SRELCVISFE SSNGENVEKG TPFSFPSLNQ EGEEEVISNL TSADSASDYF 120 VSPENELEQS ALEQNGLPAA LYSSFMSYGT DFMDDENFLN FDHTDMF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 1e-23 | 1 | 60 | 9 | 68 | OsWRKY45 |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020584387.1 | 1e-124 | probable WRKY transcription factor 70 | ||||
TrEMBL | A0A2I0WGT3 | 4e-91 | A0A2I0WGT3_9ASPA; Putative WRKY transcription factor 70 | ||||
STRING | GSMUA_Achr5P07490_001 | 7e-41 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7656 | 35 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 2e-26 | WRKY DNA-binding protein 70 |