PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_21851 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | bHLH | ||||||||
Protein Properties | Length: 244aa MW: 27649.8 Da PI: 6.1606 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20.5 | 8.6e-07 | 2 | 40 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 RRdr+N+ f eL ++ ++ +K++Ka+iL A+ +k+L PEQU_21851 2 RRDRLNEQFLELGNVIDPD----RPKNDKATILGDAILMLKDL 40 ****************997....79************999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.702 | 1 | 40 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.31E-5 | 2 | 45 | No hit | No description |
SuperFamily | SSF47459 | 2.88E-10 | 2 | 60 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.1E-11 | 2 | 63 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MRRDRLNEQF LELGNVIDPD RPKNDKATIL GDAILMLKDL TAQVHRLKAE HTLLSEESRE 60 LTQEKNELRE EKSALKSEID NLNTQYQQRL GCLYPWATVD PSVIIRSPSP YSFPISVPIP 120 SGPVPFHTSI PLYPFFQNQS PAAVPSHCSS YHPFASSSNP YVEQQPTQQL PPHPHRCNDD 180 DRSTTRNESR SWSSERLRCG VSERSSDFSD VVTELELKIP GSANRSDSKS AIIQQVFYYS 240 CSGF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020591413.1 | 1e-173 | transcription factor bHLH121-like | ||||
TrEMBL | A0A2I0VIK6 | 1e-126 | A0A2I0VIK6_9ASPA; Transcription factor bHLH121 | ||||
STRING | XP_008788362.1 | 4e-91 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11767 | 25 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.1 | 1e-58 | bHLH family protein |