PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_20629 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | VOZ | ||||||||
Protein Properties | Length: 620aa MW: 69793.7 Da PI: 6.9453 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 419.7 | 4.7e-129 | 342 | 558 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 ppp+afl+ kcalwdc+rp+qgsew+qdycssfhatla+negl+g+ pvlrp+gidlkdg+lfa+l ak+qgk+vgip+cegaat kspwna+elfdls PEQU_20629 342 PPPAAFLRQKCALWDCPRPTQGSEWCQDYCSSFHATLAFNEGLLGMIPVLRPGGIDLKDGPLFASLAAKAQGKDVGIPQCEGAATIKSPWNAPELFDLS 440 89************************************************************************************************* PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakg 198 +lege++rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqps++fewhl+eyei+++d +alyrle+kl+d+kks+++ PEQU_20629 441 VLEGESLREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMEEFGGLKRSYYMDPQPSNHFEWHLFEYEISNSDVCALYRLEFKLTDHKKSSRA 539 *************************************************************************************************** PP VOZ 199 kvskdsladlqkklgrlta 217 k + d l+dlq+++g+l+a PEQU_20629 540 KPNVDLLVDLQQQMGKLSA 558 *****************97 PP |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009631 | Biological Process | cold acclimation | ||||
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 620 aa Download sequence Send to blast |
MGKDCRSASH QMFKDKAKNR VDDLQGMFSD LQSARRESRV GDVAVLEEQV NLMLREWKAE 60 LNEASPANSL LGYSRVSSDL SSEIRRLLQL GEEEDDATSK FAELPPTNLK PEPVDTPEAF 120 VGSGQGARSA AFQEVDFSAH FSSFSCFHSL KSVLAEVVLF PLQEVSPFHL TNTSFTLPTP 180 RRTPSIYNSS KITSKLYVSV GSSVGTPHKE RKQQPNKNMH KESKPSVFPL LESPFSLSKL 240 SFLAYSPNSS NFSSLHRRLL HISVMLLNYH VHQELLQNEF VTANQYRVNL TIDTADAVSN 300 CQVASAVDYP QFNLNQDMQN NQYIDAVTLL PHFQEMLPMI CPPPAAFLRQ KCALWDCPRP 360 TQGSEWCQDY CSSFHATLAF NEGLLGMIPV LRPGGIDLKD GPLFASLAAK AQGKDVGIPQ 420 CEGAATIKSP WNAPELFDLS VLEGESLREW LFFDKPRRAF ESGNRKQRSL PDYSGRGWHE 480 SRKQVMEEFG GLKRSYYMDP QPSNHFEWHL FEYEISNSDV CALYRLEFKL TDHKKSSRAK 540 PNVDLLVDLQ QQMGKLSAKN CSDKKRHGKG RAKANHDNTE CAQNELIPTI NGSPIYGPHL 600 PYAYSMEGFN HDNYYGSNLK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020574331.1 | 0.0 | transcription factor VOZ1 | ||||
Swissprot | Q9SGQ0 | 1e-127 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | M0SP17 | 0.0 | M0SP17_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr4P15020_001 | 0.0 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2343 | 38 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 1e-130 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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