PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_20471
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 749aa    MW: 82816.2 Da    PI: 6.7705
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_20471genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.18.5e-083981347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT +E+e +  a +q G++ +++I  +++  +  +q++++++ +
       PEQU_20471 39 AWTRQEQENFFSALRQVGKN-FEKITCRVQ-SKNKNQVRHYYYRL 81
                     6*****************99.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.14E-93486IPR009057Homeodomain-like
PROSITE profilePS5129311.263586IPR017884SANT domain
SMARTSM007173.5E-53684IPR001005SANT/Myb domain
CDDcd001672.25E-53982No hitNo description
PfamPF002497.3E-63981IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.9E-53984IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 749 aa     Download sequence    Send to blast
MPSTESALLN DVDYNFGPST SVTSGTQKSG QKRTRQWAAW TRQEQENFFS ALRQVGKNFE  60
KITCRVQSKN KNQVRHYYYR LVRRMNKLLS PGFCLDAKNS KDTNAAMLRW SQDQLKGGQQ  120
LRLLAKATQR IKRLTAKESQ LLKDRNKARR KRPCQGENCL ETSATWRFSE HDFVGVKAVV  180
ADAENTPKIG INRGPSMKRN TNSNVSFSKG VFPATKATGQ RHRTGLVESA AYKRWEKAAM  240
AGVSLVADAA EQLERVTNCE NSTSTQDMHN FSGVGSHRIG ETVVQTREKL KLQLFPVDED  300
TRQRIEKGAN NPFLELTLSA RKRISSVLEH LNRKWGTDTI GSAELLLLPY NIQQGDIARC  360
QRWTIKDADS TAADVHAAVG NPSVFRLRYC WFSGHEPGAR LSNSTSAPDS DDYFHSEDII  420
KRFIPPGASE TTHFCCTSKL VGESCNGSPL PSATSITEMR AQSDTLKLKD GLPESSGKSP  480
SLNAYRAKEG SGNQAEDMSD PAVRCSSDLL AGEWADSLTN ISIGDLLLET SEASSQQNSL  540
CLQQTSFSCD SFDAAVAAHS YFPQFSGLGT QAPVVSIWNA EETCDEFSFK TSPTLGEKGF  600
NLSTNVSPRV SRDPVDMNSP GLVDRYVEDF KKSRHSNDNP SDEPESDNPS AFSCKQEPVK  660
DVSLTDLYWP DSLGSLGQLD LDLPFSRYPS QDICFSERSI SQSSFNGMMA GCLDLFQSGS  720
RLGTEKKEIV GTVEEASGFD DEKMALEDC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573144.10.0TSL-kinase interacting protein 1
TrEMBLA0A2I0WRW20.0A0A2I0WRW2_9ASPA; TSL-kinase interacting protein 1
STRINGXP_008791198.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54783643
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.31e-126TSL-kinase interacting protein 1