PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_19717 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | bHLH | ||||||||
Protein Properties | Length: 255aa MW: 28838.3 Da PI: 10.6786 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.6 | 1.7e-11 | 2 | 50 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +Er+RR+++N+ + Lr+l P + k+ + a+i A+e+Ik++q PEQU_19717 2 SHITVERNRRRQMNEHLKVLRSLTPCF---YIKRGDQASIIGGAIEFIKEMQ 50 7999**********************9...9*******************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 4.79E-11 | 1 | 54 | No hit | No description |
PROSITE profile | PS50888 | 14.316 | 1 | 49 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.4E-11 | 2 | 61 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 6.41E-15 | 2 | 66 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.4E-8 | 2 | 50 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.1E-10 | 4 | 55 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009913 | Biological Process | epidermal cell differentiation | ||||
GO:0010374 | Biological Process | stomatal complex development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MSHITVERNR RRQMNEHLKV LRSLTPCFYI KRGDQASIIG GAIEFIKEMQ QLLHSLESKK 60 KRKCLSPSPS PSPRPSILSL TSPPPLASSS PNFEVVKELS ACCNSSVADV EAKISGSNVI 120 LKTLSKSIPG QMVKIITVLE RLGFEILHLS ISSMEDTVLY SFVIKVIITF SFFLLRINLC 180 LNDLSFHLLK LTTHLRQLIW CGGILKTHLF CLGKLRFGSL FVFKTLKIVF SHRTYLGAVT 240 TFWLRSDFSL KKKKL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Together with FMA and SPCH, regulates the stomata formation. Required for the differentiation of stomatal guard cells, by promoting successive asymmetric cell divisions and the formation of guard mother cells. Promotes the conversion of the leaf epidermis into stomata. {ECO:0000269|PubMed:17183265, ECO:0000269|PubMed:17183267}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By UV, flagellin, and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020586858.1 | 1e-115 | transcription factor MUTE | ||||
Swissprot | Q9M8K6 | 1e-66 | MUTE_ARATH; Transcription factor MUTE | ||||
TrEMBL | A0A2I4GSN0 | 7e-86 | A0A2I4GSN0_JUGRE; transcription factor MUTE | ||||
STRING | Gorai.006G054300.1 | 1e-76 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11144 | 34 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06120.1 | 2e-64 | bHLH family protein |