PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_19549 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | GeBP | ||||||||
Protein Properties | Length: 268aa MW: 29376.4 Da PI: 10.8198 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 57 | 5.6e-18 | 8 | 73 | 32 | 97 |
DUF573 32 ddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 d++ fy+ +++s+s +++sql+eK+rrL+kK++++ ++++g++ps ++hd++ ++ls ++W+ PEQU_19549 8 RDLNIFYDRFSESMSQPYTRSQLSEKLRRLRKKYRTMAGRIARGQDPSRLSQHDRDLLHLSTRLWD 73 699**************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 3.7E-17 | 8 | 73 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence Send to blast |
AQGLVFPRDL NIFYDRFSES MSQPYTRSQL SEKLRRLRKK YRTMAGRIAR GQDPSRLSQH 60 DRDLLHLSTR LWDPSNASTS PFSAPDAVAA GSAGNKRRRP NPRAPTSRAR ASSSPHQVIV 120 ALESALLPPP NPPLALPSTS PVAYKKECMD PLPSIGHNGS IDGANFAASP EEIPKNKLPT 180 PPISSSVDPK RSGAKHLAIK SVLDVLDVAL NEVRSTLANQ GIISSNGTSE QGLEMKGMSK 240 RWQAHRLAEL DLLAQRWRLV VEEKATQI |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020594920.1 | 0.0 | probable transcription factor At3g04930, partial | ||||
TrEMBL | A0A2I0XHN8 | 1e-146 | A0A2I0XHN8_9ASPA; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8695 | 32 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 1e-09 | DNA-binding storekeeper protein-related transcriptional regulator |