PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_19397
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family AP2
Protein Properties Length: 353aa    MW: 38451 Da    PI: 5.4987
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_19397genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.29.7e-14166225155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpse..ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++ k++g+++A+++d ++   g  ++ k+++lg++ ++e+Aa+a++ a +k++g
  PEQU_19397 166 SCYHGVTRLKWSGKYEAHLWDKTSrvEGsrRKgKHVYLGSYESEEKAARAHDLAVLKYWG 225
                 79*******************666686687336************************987 PP
2AP250.45.7e-16271324255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.kr..krfslgkfgtaeeAakaaiaarkkleg 55 
                  ++GV++ +k+g+W A+I  +   g  r  k ++lg+fgt+eeAa+a++ a+ +l+g
  PEQU_19397 271 AFRGVTRLRKDGKWQARIGRV---GeSRdvKDIYLGTFGTEEEAAEAYDIAAIELRG 324
                 58***99999********998...553458*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.4E-11166225IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-14166236IPR016177DNA-binding domain
PROSITE profilePS5103217.794167235IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-13167236IPR001471AP2/ERF domain
SMARTSM003807.5E-20167241IPR001471AP2/ERF domain
CDDcd000186.58E-15168237No hitNo description
PRINTSPR003674.2E-5168179IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-15270334IPR016177DNA-binding domain
CDDcd000181.64E-20270334No hitNo description
PROSITE profilePS5103218.11271332IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-16271332IPR001471AP2/ERF domain
SMARTSM003801.1E-23271338IPR001471AP2/ERF domain
PfamPF008475.0E-10272324IPR001471AP2/ERF domain
PRINTSPR003674.2E-5314334IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MPILLSSNNK GEGFDEFSTV VQESYPLQST ASGPAGGEKY CSLEADSVGS DAQPLPAHVN  60
DSLLNAIEEG VNFPETPLLK AAEIIGDAGH EVSVCEVARK EGYVESLGCD QEACVSESSA  120
TRDATSEVAV NGSVESPSVV SANCGAKRVG GVLAMAMRKY AVPKSSCYHG VTRLKWSGKY  180
EAHLWDKTSR VEGSRRKGKH VYLGSYESEE KAARAHDLAV LKYWGLSQTT KLNFPVSDYE  240
DELEIMKTMT QDEYVAHVKR KNSCFSRGAS AFRGVTRLRK DGKWQARIGR VGESRDVKDI  300
YLGTFGTEEE AAEAYDIAAI ELRGVHAVTN FDISNYCEGS FKRMEGPPCK LQT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020572789.10.0AP2-like ethylene-responsive transcription factor PLT2 isoform X1
TrEMBLA0A2I0WE050.0A0A2I0WE05_9ASPA; AP2-like ethylene-responsive transcription factor AIL5
STRINGXP_008807712.11e-122(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78643548
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.13e-64AINTEGUMENTA-like 5