PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_17110
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GATA
Protein Properties Length: 493aa    MW: 55469.2 Da    PI: 6.5126
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_17110genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.11.9e-16741135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C++Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  PEQU_17110  7 CRHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGS 41
                ****************88888***********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004016.7E-10153IPR000679Zinc finger, GATA-type
SuperFamilySSF577165.7E-11444No hitNo description
CDDcd002023.62E-16653No hitNo description
Gene3DG3DSA:3.30.50.103.3E-12741IPR013088Zinc finger, NHR/GATA-type
PROSITE patternPS003440732IPR000679Zinc finger, GATA-type
PfamPF003203.0E-14741IPR000679Zinc finger, GATA-type
PROSITE profilePS5011411.2740IPR000679Zinc finger, GATA-type
PfamPF139193.4E-10246328IPR028020ASX homology domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    Send to blast
MGKHGPCRHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG SLANYTPLHA REPIEWEEPK  60
VTKMKSISFK TTEQKLQKRK HVKGIVENLR EIPFSESDQN YIRNFEGDAS NRSSSGSAIS  120
YSESCSAQSN AWDSLVPVPS KRRTVINLKP SVEKLTKDLY SIWHEQQSSN LSGSSEEELL  180
FEGETPMGSV EIGHGGVLLR YPSSKPVEEE SEASSLPVDK KLIAEGYSLL SQIHICRDKF  240
SLENLDILRN RDSALIFTDL KDIINHEVFM EHMTKEEQQQ LMKYLPSIDT AKATESLRCL  300
FSSPKFLENF SYFQQLLQDG IFDLSSSQIN VEECRSLKRL VLCNFTKSSW VQRYEELKVS  360
NKSKGSMRSP KRACRSSNTK FSLTKSSVLN PNEAGSTEIV DTEDFLDNEG SCFSPRSLFA  420
SPPDRSSMLQ FTDDGSDQNL LLDVRCSTSF PDAELLYHHP WKQKTKSNSS LVENSAVADE  480
ESLSNFPASG FHG
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020574434.10.0GATA transcription factor 26-like isoform X1
SwissprotQ8W4H11e-97GAT26_ARATH; GATA transcription factor 26
TrEMBLA0A2I0X1Y20.0A0A2I0X1Y2_9ASPA; GATA transcription factor 26
STRINGXP_008794912.11e-180(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44243464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47140.12e-83GATA transcription factor 27