PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_16698
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family B3
Protein Properties Length: 368aa    MW: 42483.8 Da    PI: 8.7384
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_16698genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.82.7e-20411231099
                 HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  ++++ +++pkkf+e+++g+     t+ l+ +sg  W v+l  +k+ +++vl  GWk Fv+a+g++e+D++vFk+dg s+f  +v +f++
  PEQU_16698  41 DFSKC-MIIPKKFIEHFNGE--LLETVELKVPSGDIWHVEL--KKTNDGVVLDCGWKYFVEAQGIEENDTLVFKYDGCSSF--LVLIFER 123
                 45555.********888766..6679***************..********************************987888..9999987 PP
2B346.66.3e-15272359190
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                 f+++++p +  k+  +++p  fa e+   +++s   +l+ ++   +W v +    + +++ +t+GWk+Fv++n Lk gD++ F+l +  ++ 
  PEQU_16698 272 FVSIMVPCSIVKRFYMTIPIAFAIEFL--PRSSNRAILKVPDKeGVWPVHC--LVQARSVGFTSGWKDFVHDNSLKIGDICFFELLEVqEDI 359
                 78899999999************9994..33444566666444389*****..88888899***********************87654544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.0E-2328126IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.24E-2429129IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086314.39531124IPR003340B3 DNA binding domain
CDDcd100171.90E-1933121No hitNo description
SMARTSM010192.5E-1534124IPR003340B3 DNA binding domain
PfamPF023621.0E-1742123IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.4E-20264356IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.75E-20265366IPR015300DNA-binding pseudobarrel domain
CDDcd100171.61E-18270367No hitNo description
PfamPF023622.9E-14272365IPR003340B3 DNA binding domain
SMARTSM010191.8E-13272366IPR003340B3 DNA binding domain
PROSITE profilePS5086312.872272368IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005773Cellular Componentvacuole
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MVEDCRYCEK WKEQCRKFEE HFYWGHVNPR RMHFSKSMTG DFSKCMIIPK KFIEHFNGEL  60
LETVELKVPS GDIWHVELKK TNDGVVLDCG WKYFVEAQGI EENDTLVFKY DGCSSFLVLI  120
FERSGCEKAA SHCARKGDPI DSLCDRPSFK RGRHSSNGNS YRHTNQAQPI TVHHKNSRAN  180
GSSEEIHVRE RKTSRRIYRR KKLLVGSRKM KAAKEEERCI IKAIENPSNE VSLDKRCSPN  240
IFIVSRKAGI DDADKNKLQS FAESIQTDKP SFVSIMVPCS IVKRFYMTIP IAFAIEFLPR  300
SSNRAILKVP DKEGVWPVHC LVQARSVGFT SGWKDFVHDN SLKIGDICFF ELLEVQEDIL  360
MTVYINRI
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00468DAPTransfer from AT4G33280Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020592103.10.0B3 domain-containing protein Os03g0620400-like isoform X2
RefseqXP_020592104.10.0B3 domain-containing protein Os03g0620400-like isoform X2
TrEMBLA0A2I0VGR50.0A0A2I0VGR5_9ASPA; B3 domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56234179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-33B3 family protein