PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14758
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 262aa    MW: 31467.1 Da    PI: 6.9665
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14758genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix83.13.6e-261697186
    trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                +W +qe+++Li++r + e+++  + ++k+lWe+vs++mr++g+ rsp qCk kw+nl +ryk  + ge ++     ++cp+f++l+
  PEQU_14758 16 QWGQQETRELIAIRADFERDFTVALRNKTLWEAVSSRMRDKGYPRSPDQCKLKWKNLVNRYKDRESGEAEN----GRHCPFFEELH 97
                7*****************************************************************99984....668******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.00261375IPR001005SANT/Myb domain
CDDcd122031.88E-211678No hitNo description
PfamPF138378.9E-231698No hitNo description
Gene3DG3DSA:1.10.10.605.7E-41675IPR009057Homeodomain-like
PROSITE profilePS500907.5151773IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
GGASGGQRSK EDKVFQWGQQ ETRELIAIRA DFERDFTVAL RNKTLWEAVS SRMRDKGYPR  60
SPDQCKLKWK NLVNRYKDRE SGEAENGRHC PFFEELHSVF TESPTMQRLL FESESGTPRS  120
KKNPKRSISE RLYEELSDDD EEEDEESDEE RPNQSKKRKA EKNVPQQQQS RAGGKSRAAI  180
SIHELLQEFM QKQQQIESHW WEMMERRQEW RQTMEKLERE RMMLERAWRE REEQRRMREE  240
SRAEKRDALL TTLLNKLIQN EL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ebi_A4e-141785780DNA binding protein GT-1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020685936.11e-118trihelix transcription factor GT-3b
TrEMBLA0A2I0X8771e-117A0A2I0X877_9ASPA; Trihelix transcription factor GT-3b
STRINGGLYMA01G35370.22e-81(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP106883037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.18e-30Trihelix family protein