PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_13530 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | GeBP | ||||||||
Protein Properties | Length: 321aa MW: 35444.9 Da PI: 9.5434 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 102.3 | 4e-32 | 53 | 151 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +fq+lw++ De+ +LqG+ +f++++g+ ++++d+ f++ ++ +++f+++k+q+veK+rrLKkK+++ v+++ sgk +f+++hd+ ++e+s+kiW PEQU_13530 53 MFQKLWTDADEMKVLQGFYEFTSRRGTthaNYQHDTGPFFDDIRTRLQFQFNKNQIVEKLRRLKKKYRNAVARIGSGKGSVFKSPHDRATYEISRKIWS 151 79************************98867777****************************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.7E-30 | 54 | 151 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence Send to blast |
MPSAGDHHRS ATLAAGVSGD GSDEATDSED LGAFDRNRRW SSSSGGSEES RRMFQKLWTD 60 ADEMKVLQGF YEFTSRRGTT HANYQHDTGP FFDDIRTRLQ FQFNKNQIVE KLRRLKKKYR 120 NAVARIGSGK GSVFKSPHDR ATYEISRKIW SSTWKRKPRN PPHSETPLTY PDQTLAVSCG 180 SESAVVQVAV AESSARVPHG IPILVSSLSG PPQPTHSPPP PPLQAPATKT GHTVEEDALR 240 ICLAPLFKEL LQSALDGATT AGAVAPPLWV LTALTAAEAS GKKDERWRLQ QILELELYLK 300 RLELVEESVR SALEKLRSMG S |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020573497.1 | 0.0 | probable transcription factor At3g04930 | ||||
TrEMBL | A0A2I0WQY5 | 1e-108 | A0A2I0WQY5_9ASPA; Mediator-associated protein 1 | ||||
STRING | XP_008807916.1 | 5e-82 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP974 | 37 | 123 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 7e-37 | DNA-binding storekeeper protein-related transcriptional regulator |