PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_12132 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | ERF | ||||||||
Protein Properties | Length: 187aa MW: 20878.2 Da PI: 5.6482 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.8 | 4.8e-17 | 44 | 93 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykGVr + + rWv+e+r+p k+ r++lg+f t+e+Aa+a++ a+++l+g PEQU_12132 44 FYKGVRCRN-TDRWVCEVREPH---KKSRIWLGTFPTPEMAARAHDVAALALRG 93 7****9665.9******99962...25*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 8.5E-25 | 44 | 107 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.745 | 44 | 101 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.11E-20 | 44 | 103 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 2.1E-6 | 45 | 56 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.46E-27 | 45 | 103 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.2E-29 | 45 | 103 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.7E-11 | 45 | 93 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.1E-6 | 67 | 83 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
NLSSLNNMDS SDPAPDHHSY MTISSAPPKR SAGRTKFRET RHPFYKGVRC RNTDRWVCEV 60 REPHKKSRIW LGTFPTPEMA ARAHDVAALA LRGRQACLNF ADSAWRLPTP ESSSPSDIQR 120 AAAQAAEAFR PVEPKEKSVP LDDPFYMEFG MQEYSDMAEG LLIDPPAMAS EEEGGSGSDG 180 DWSLWSY |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}. | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00557 | DAP | Transfer from AT5G51990 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020574183.1 | 1e-132 | dehydration-responsive element-binding protein 1G-like | ||||
Swissprot | A2XWL6 | 9e-61 | DRE1E_ORYSI; Dehydration-responsive element-binding protein 1E | ||||
Swissprot | Q8H273 | 9e-61 | DRE1E_ORYSJ; Dehydration-responsive element-binding protein 1E | ||||
TrEMBL | A0A2I0V7L6 | 4e-99 | A0A2I0V7L6_9ASPA; Dehydration-responsive element-binding protein 1E | ||||
STRING | XP_008803257.1 | 8e-78 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP196 | 36 | 261 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25490.1 | 2e-45 | C-repeat/DRE binding factor 1 |
Publications ? help Back to Top | |||
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