 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PEQU_11740 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
| Family |
GRAS |
| Protein Properties |
Length: 468aa MW: 50658.3 Da PI: 4.6175 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_11740 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 243.6 | 7.9e-75 | 103 | 453 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96
lv+lL+++Aea++ ++ la+ +L rl+el s g ++++Rla +ft AL++ l + + + lpp n e++ a++l++++sP++kf+h+
PEQU_11740 103 LVHLLMAAAEALTGANKCgdLARVILIRLRELLSHGGaTNIERLAEHFTDALQRLLDG--VGRHDDLPP------NPGEVIEAFQLLQDMSPYVKFGHF 193
68************999888**************99999***************9999..223333333......4567999***************** PP
GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
taNqaIleav+ge+rvHi+D+di++G+QW++L+qa+ RiT+v + + s +++ tg+rLa fA+++g++f+f r+++ ++
PEQU_11740 194 TANQAILEAVAGERRVHIVDYDIMEGVQWASLIQAM----------RITAVTRCGGNrrSGTSVMDTGRRLAAFAASVGLSFSFGQC---RMDAD--DQ 277
**********************************96..........777777744445699************************95...44444..67 PP
GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nse...sFlerflealeyysalfdsleaklpreseerikvEre 288
Lr g V +l +s++ ++L+ +l ++vv+vve+ + + ++ F+ f+e ++ ysa+ dslea++p + +r +vE+
PEQU_11740 278 LRPAAGK--GVEGPPHLPWRS--AASVA----SFLRSAGELGARVVTVVEEAVACcGGDvngGFVGSFMEEMKRYSAIWDSLEAGFPMQGAARGVVEKL 368
7666665..456666444433..34444....5*******************88854334559************************************ PP
GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaW 373
+lg+ i v+ + ++r+e e+ e W e++ee+GF++v ls ++ +q +lll ++ dgyrv+ee s+ lv++Wk+ +L+s+S+W
PEQU_11740 369 ILGPMIAGSVSRAYRRREEGGEEREGWAEWMEEVGFGTVGLSFFNLCQSRLLLGLFN-DGYRVQEEgSNKLVFCWKNCRLLSASVW 453
*********************************************************.******87699***************** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MEVDMEHMMN FVFSGCSSAS STTTLGDVNW VDWSPAIDWG CLSVDDDFSG LLEHYGLPCT 60
PAANDWSTNV SPASTNCPGT PVEDLLPLPA AESSRDDDKG LRLVHLLMAA AEALTGANKC 120
GDLARVILIR LRELLSHGGA TNIERLAEHF TDALQRLLDG VGRHDDLPPN PGEVIEAFQL 180
LQDMSPYVKF GHFTANQAIL EAVAGERRVH IVDYDIMEGV QWASLIQAMR ITAVTRCGGN 240
RRSGTSVMDT GRRLAAFAAS VGLSFSFGQC RMDADDQLRP AAGKGVEGPP HLPWRSAASV 300
ASFLRSAGEL GARVVTVVEE AVACCGGDVN GGFVGSFMEE MKRYSAIWDS LEAGFPMQGA 360
ARGVVEKLIL GPMIAGSVSR AYRRREEGGE EREGWAEWME EVGFGTVGLS FFNLCQSRLL 420
LGLFNDGYRV QEEGSNKLVF CWKNCRLLSA SVWSAPALES MAVSSFSW
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking and DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK). {ECO:0000269|PubMed:15961668}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced 24 hours after treatment with Nod factor or Sinorhizobium meliloti. {ECO:0000269|PubMed:15961668}. |
