PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_10426
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 275aa    MW: 30900.7 Da    PI: 4.6816
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_10426genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.19.8e-09177205129
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar 29 
                      r+ WT+eEd  l+ av+++G g+W+ I +
       PEQU_10426 177 RKLWTKEEDSELIAAVEKFGEGNWANILK 205
                      567**********************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.178172216IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.602.3E-12173218IPR009057Homeodomain-like
SuperFamilySSF466891.17E-9175219IPR009057Homeodomain-like
SMARTSM007171.3E-5176227IPR001005SANT/Myb domain
PfamPF002494.7E-7177205IPR001005SANT/Myb domain
CDDcd116609.17E-12180219No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
RYGASTIFTL LQEISLAAEK DVTIDWRTLV KATSTGISNA QEYQMLWRHL AYRVPLEKVE  60
DGGDPLSDES DLEFELEATP NLSEELSTEV DCCVKVILSS GAGDDCSPVA LNVEAPSTTD  120
TPIEQVSVFP SDKHYFGRYN RAAPYGAVLN GQKQLLSTGL SNEGLDGNGS FPEKKKRKLW  180
TKEEDSELIA AVEKFGEGNW ANILKGDFKH DRTASQLSQV FLCEPIGYIL SHNAFQYYLP  240
GINCLHHTFI NFNVEPIFFY CHHKKSFFFW DVCYS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173178KKKRKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573705.11e-159uncharacterized protein LOC110020075
TrEMBLA0A2I0WNR11e-116A0A2I0WNR1_9ASPA; Uncharacterized protein
STRINGXP_010277512.11e-68(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP46843754
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.13e-43MYB_related family protein