PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_09030 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | GeBP | ||||||||
Protein Properties | Length: 96aa MW: 11366.9 Da PI: 10.915 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 54 | 4.7e-17 | 24 | 88 | 2 | 63 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKk 63 +fq+lw+ De+ +LqG+ +f++k+g+ +++ d+ f++++ +++f+++k+q+ eK rr Kk PEQU_09030 24 MFQKLWTHADELKVLQGFFEFTSKKGTthaNYQYDTGPFFNQIWPRLQFNFNKNQIAEKQRRPKK 88 79************************98855555***************************9887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.5E-13 | 25 | 88 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence Send to blast |
MIGIGDHIHR QIANTSKGEE SRRMFQKLWT HADELKVLQG FFEFTSKKGT THANYQYDTG 60 PFFNQIWPRL QFNFNKNQIA EKQRRPKKST TTLPPR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020590480.1 | 2e-50 | probable transcription factor At3g04930 | ||||
TrEMBL | A0A2I0WQY5 | 6e-45 | A0A2I0WQY5_9ASPA; Mediator-associated protein 1 | ||||
STRING | XP_008807916.1 | 5e-28 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP974 | 37 | 123 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 7e-18 | DNA-binding storekeeper protein-related transcriptional regulator |