PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_06950
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 214aa    MW: 23385.1 Da    PI: 10.0115
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_06950genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H220.21.5e-066890123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                + C++Cg+sF+++  L  H++ H
  PEQU_06950 68 FDCHYCGRSFPTSQALGGHQNAH 90
                77******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.603.3E-46194IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576671.56E-66696No hitNo description
PROSITE profilePS5015712.3416895IPR007087Zinc finger, C2H2
PfamPF139124.9E-76892IPR007087Zinc finger, C2H2
PROSITE patternPS0002807090IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010026Biological Processtrichome differentiation
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MNVSSFSQLP FIRPTQTKDK PPSSSSATAP AAAIRLFGID VPHDHTIATT TTITAAAATT  60
SHGISRKFDC HYCGRSFPTS QALGGHQNAH KRERKHAQRA QLQSAMATAH HRTSPFEHHH  120
IYHNFSPFST SRFSSFLSNG YQYSNYSPPI HGSPLPPLWR ARAPVRAEIR PLIPFFGGDG  180
DSSSSTISSI SPQNRLVCET VDGGKENVSL DLHL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020584563.11e-157zinc finger protein 8-like
TrEMBLA0A2I0WQQ22e-89A0A2I0WQQ2_9ASPA; Zinc finger protein 6
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8341720
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41940.13e-20zinc finger protein 8