PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_06837
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 187aa    MW: 20720.2 Da    PI: 8.7722
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_06837genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.00078523321
                ETTTTEEESSHHHHHHHHH CS
     zf-C2H2  3 CpdCgksFsrksnLkrHir 21
                C  Cg+ F ++  L  H+r
  PEQU_06837  5 CYVCGRQFGNWKALFGHMR 23
                99****************8 PP
2zf-C2H220.21.6e-06125147123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++Cp Cg+ F + + +++H+r+H
  PEQU_06837 125 FVCPLCGRQFATYHGMRVHQRVH 147
                 89*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.48325IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.787330IPR007087Zinc finger, C2H2
PfamPF139123.4E-5527IPR007087Zinc finger, C2H2
PROSITE patternPS000280525IPR007087Zinc finger, C2H2
SMARTSM003552.16890IPR015880Zinc finger, C2H2-like
SuperFamilySSF576673.13E-86890No hitNo description
PROSITE profilePS501579.7646895IPR007087Zinc finger, C2H2
PfamPF139122.2E-86892IPR007087Zinc finger, C2H2
PROSITE patternPS0002807090IPR007087Zinc finger, C2H2
SuperFamilySSF576673.13E-8120147No hitNo description
Gene3DG3DSA:3.30.160.602.3E-5123148IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003555.3E-4125147IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.655125152IPR007087Zinc finger, C2H2
PfamPF138942.1E-4125147No hitNo description
PROSITE patternPS000280127147IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MQADCYVCGR QFGNWKALFG HMRCHPEREW RGVRPSAEGE EGSRGRRKWR RRTGEETTEA  60
AAATTGEYAC GECLRVFGTR QALGGHRASH RGVMGCSAKA KETTTGTGAA AAAELRGVRG  120
DGRTFVCPLC GRQFATYHGM RVHQRVHRRQ HGETALSGRE ERGFMVDLNL PPPPEAEEEE  180
VKDVGNY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020584552.11e-137zinc finger protein ZAT3-like
TrEMBLA0A2I0XC971e-64A0A2I0XC97_9ASPA; Zinc finger protein ZAT2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130102729
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.15e-17C2H2-like zinc finger protein