PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_05824
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 379aa    MW: 41899.3 Da    PI: 7.0352
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_05824genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.15.7e-31162220259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  PEQU_05824 162 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 220
                 699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081133.109156222IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.7E-31158222IPR003657WRKY domain
SuperFamilySSF1182902.35E-26159222IPR003657WRKY domain
SMARTSM007741.4E-37161221IPR003657WRKY domain
PfamPF031067.4E-26163220IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MCDYFYQRME NSQGDLTDII RSHSLMNPTH PTNDSSAAAN RWQFLHEQAP EFQRLDDRVL  60
GAGPLLHETS FFDSSENSAS GSLFSRMPQI SLGKGKGSPA IGAPSVLSVG GGGGGGGGAA  120
EISSTRLMAA GTKRRKSQAK KVVCIPAPAA ASGRPSGEVV PSDLWAWRKY GQKPIKGSPY  180
PRGYYRCSSS KGCSARKQVE RSRTDPNMLV ITYTSEHNHP WPTQRNALAG STRSQPSKTN  240
NSSSTSKNSP HHNNHKQYTT IKEEPKECSS SNAPLQVKEE AHDEMEKTLI DHQDHHDFNS  300
VFDESFNEHM MSNLNQPDNF FADLEELDPD PMNLIFPKGF MGYKLDEERN NNNNNKAVDP  360
FNMLDWGEGN MFGESKRGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-25136223280Disease resistance protein RRS1
5w3x_D1e-25136223280Disease resistance protein RRS1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020574671.10.0probable WRKY transcription factor 14
SwissprotQ9SA806e-70WRK14_ARATH; Probable WRKY transcription factor 14
TrEMBLA0A2I0WNJ90.0A0A2I0WNJ9_9ASPA; Putative WRKY transcription factor 35
STRINGXP_008788702.11e-123(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25923888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.15e-66WRKY DNA-binding protein 14
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]