PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_05535
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 359aa    MW: 39704.8 Da    PI: 6.0451
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_05535genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.29.2e-062502871254
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  PEQU_05535 250 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 287
                 677888999*******998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.487238287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.03E-11248305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.83E-6248292No hitNo description
Gene3DG3DSA:4.10.280.108.5E-9252294IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042631Biological Processcellular response to water deprivation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071472Biological Processcellular response to salt stress
GO:2000214Biological Processregulation of proline metabolic process
GO:2000377Biological Processregulation of reactive oxygen species metabolic process
GO:0005634Cellular Componentnucleus
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MAEDFQSSNW WKTSRSRGRV DAGSSDDYDG ASPATSTTIP EGTGAPFAWQ VGAAATRQLK  60
DSTLQLSGFG LSSPSMDWDQ TLLSSSGRGE SSFQAMLQED LNSRSVFSAA HESSSSSPVQ  120
LKHINQPFFF DNSSISGSGF PLVSSTSSTS SIMQGFLEND SRHEQSLFDS QQMFHYQQSQ  180
FIQQKHQSAM VNHLQFTNNT PFWNASSFSQ PFDLPIKGLE GGQEKKSSSE PALKKIRAET  240
ASTLPTFKVR KEKLGDRITA LQQLVSPFGK TDTASVLHEA IEYIKFLHDQ VSVLSTPYLK  300
NGHPMQQQQQ SSEKFEEGEW QKQDLRSRGL CLVPISSTYP VATETNADFW TPTFGGAYR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020589607.10.0transcription factor bHLH112-like isoform X1
TrEMBLA0A2I0WR410.0A0A2I0WR41_9ASPA; Transcription factor bHLH112
STRINGXP_008789835.13e-99(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29703464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.14e-51bHLH family protein