PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_05429
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 93aa    MW: 10131.8 Da    PI: 10.669
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_05429genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2316.2e-101381555
         AP2 15 WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +vAeIrdp++   ++r++lg+f++ae+ a+a++  ++kl g
  PEQU_05429  1 FVAEIRDPVK---KTRIWLGTFDSAEDIARAYDVVARKLCG 38
                69*****654...5***********************9977 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.289146IPR001471AP2/ERF domain
SMARTSM003807.8E-12152IPR001471AP2/ERF domain
SuperFamilySSF541715.36E-11146IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.8E-18146IPR001471AP2/ERF domain
CDDcd000185.81E-18145No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    Send to blast
FVAEIRDPVK KTRIWLGTFD SAEDIARAYD VVARKLCGPK GKTIFPPPPP PPSSAIHRFL  60
PVPMPPSPTS SSMTSTVEFF SGPRLSIPRP SSI
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways and could also regulate other AtERFs. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:11487705, ECO:0000269|PubMed:9756931}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA), ethylene and Alternaria brassicicola (locally and systemically). Moderate induction by wounding or drought stress does not require EIN2, whereas induction by NaCl does. Transcripts accumulate slightly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by ethylene, exogenous abscisic acid (ABA), cold and heat stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001304374.21e-24AP2-EREBP transcription factor
RefseqXP_028218135.11e-24ethylene-responsive transcription factor 3-like
SwissprotO803395e-17ERF82_ARATH; Ethylene-responsive transcription factor 3
TrEMBLA0A0K2CTA82e-23A0A0K2CTA8_SOYBN; AP2-EREBP transcription factor (Fragment)
TrEMBLA0A445LUJ92e-23A0A445LUJ9_GLYSO; Ethylene-responsive transcription factor 3
TrEMBLC6TFQ72e-23C6TFQ7_SOYBN; Uncharacterized protein
STRINGGLYMA02G43500.14e-24(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP156151014
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.19e-18ethylene response factor 7
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]