PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_03719 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | bZIP | ||||||||
Protein Properties | Length: 93aa MW: 10988.6 Da PI: 8.8103 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.4 | 1.3e-12 | 1 | 48 | 10 | 57 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +++NRe+ArrsR RK+ +eeL+ v+ L a N++L ++l++l + PEQU_03719 1 MISNRESARRSRMRKQRHLEELAGQVARLRAANRQLLDKLNKLMRDQE 48 689**************************************9987665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.2E-6 | 1 | 56 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.2E-10 | 1 | 48 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.507 | 1 | 57 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.26E-10 | 1 | 45 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.7E-9 | 1 | 45 | No hit | No description |
CDD | cd14702 | 1.28E-10 | 1 | 45 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 93 aa Download sequence Send to blast |
MISNRESARR SRMRKQRHLE ELAGQVARLR AANRQLLDKL NKLMRDQEDA QDEKQRLSEE 60 MSELQKRLTA MLEEHCDEPN IAHIRTMILS TCS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 8 | 15 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020600155.1 | 5e-60 | basic leucine zipper 43-like | ||||
Swissprot | Q9FMC2 | 7e-15 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A2I0XBR3 | 4e-38 | A0A2I0XBR3_9ASPA; DNA-binding protein EMBP-1 | ||||
STRING | OPUNC09G12140.1 | 2e-18 | (Oryza punctata) | ||||
STRING | OPUNC09G12240.1 | 2e-18 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 7e-20 | basic leucine-zipper 42 |
Publications ? help Back to Top | |||
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