PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_02636
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family NAC
Protein Properties Length: 357aa    MW: 40915.6 Da    PI: 7.8144
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_02636genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.51.1e-48291672128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                  pGfrFhPtdeelv +yL++kv++kk    ++ik++diyk++Pw+Lp+          + + +ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d+
  PEQU_02636  29 LPGFRFHPTDEELVGFYLRRKVDKKKPLSIDTIKQIDIYKYDPWELPSnvisvafyaeMSTIGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDR 127
                 69*********************999555589***************558889887753444999********************************** PP

         NAM  91 evlskkgel..vglkktLvfykgrapkgektdWvmheyrl 128
                 +++s ++++  +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  PEQU_02636 128 PIYSGNNADdcIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 167
                 ****7433356***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.58E-5128202IPR003441NAC domain
PROSITE profilePS5100553.44528202IPR003441NAC domain
PfamPF023651.2E-2430167IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005992Biological Processtrehalose biosynthetic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006561Biological Processproline biosynthetic process
GO:0009718Biological Processanthocyanin-containing compound biosynthetic process
GO:0010120Biological Processcamalexin biosynthetic process
GO:0042538Biological Processhyperosmotic salinity response
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MEEKKMVGFE EKSNRKGGEV VDEEEKLVLP GFRFHPTDEE LVGFYLRRKV DKKKPLSIDT  60
IKQIDIYKYD PWELPSNVIS VAFYAEMSTI GEKEWYFFCL RGRKYRNSIR PNRVTGSGFW  120
KATGIDRPIY SGNNADDCIG LKKSLVYYRG SAGKGTKTDW MMHEFRLPSS NKTCNSSTPP  180
TINEAVRQSS RESWTICRIF KRNVSFKRYA QQMKGKEGEG GVGMQNSADS SSKTSSTESE  240
AGEEHRYLHG GCSFKQGDES YANRYVEENG DQLYSAGQWN YEAQTNSFSL TSNFVNLNQN  300
EIFREGNWEE IGRMVDYMLE PVRRAHAELC VPSGHSSTSR LYDYDSGPTV IQRDVRL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-43172085171NO APICAL MERISTEM PROTEIN
1ut4_B3e-43172085171NO APICAL MERISTEM PROTEIN
1ut7_A3e-43172085171NO APICAL MERISTEM PROTEIN
1ut7_B3e-43172085171NO APICAL MERISTEM PROTEIN
3swm_A4e-43172088174NAC domain-containing protein 19
3swm_B4e-43172088174NAC domain-containing protein 19
3swm_C4e-43172088174NAC domain-containing protein 19
3swm_D4e-43172088174NAC domain-containing protein 19
3swp_A4e-43172088174NAC domain-containing protein 19
3swp_B4e-43172088174NAC domain-containing protein 19
3swp_C4e-43172088174NAC domain-containing protein 19
3swp_D4e-43172088174NAC domain-containing protein 19
4dul_A3e-43172085171NAC domain-containing protein 19
4dul_B3e-43172085171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00310DAPTransfer from AT2G43000Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020595540.10.0transcription factor JUNGBRUNNEN 1-like
TrEMBLA0A2I0WQB11e-158A0A2I0WQB1_9ASPA; Transcription factor JUNGBRUNNEN 1
STRINGXP_008806688.11e-114(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP119138129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-79NAC domain containing protein 42