PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_02573 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | Dof | ||||||||
Protein Properties | Length: 238aa MW: 27332.8 Da PI: 6.2811 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 117.2 | 6.4e-37 | 25 | 82 | 5 | 62 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + +cprCds ntkfCyynny+l+qPry+CkaCrryWtkGG+lrn+PvGgg+rk++++ PEQU_02573 25 TPNCPRCDSPNTKFCYYNNYCLTQPRYLCKACRRYWTKGGSLRNIPVGGGCRKSRRRD 82 568***************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 4.0E-25 | 23 | 80 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 27.978 | 26 | 80 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 4.6E-30 | 26 | 80 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 28 | 64 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MLPHYSFHPL PNTDLQWRPI VQEPTPNCPR CDSPNTKFCY YNNYCLTQPR YLCKACRRYW 60 TKGGSLRNIP VGGGCRKSRR RDSVKRTSTV PTSPSSPPTS LRPDEALETM SGGKGGSFPS 120 PDLRSLSLAQ FYTKFLNHTP DQFEQGEADL MPMMTMPFLE ESLERQSSAE IGIGEEAVLS 180 SNYVERRLME EENRFLKDEL LEVQERRGVV DYNDSYLMSL NNYELKTDLM WEVRGFSG |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020595823.1 | 1e-178 | dof zinc finger protein DOF5.7-like | ||||
Swissprot | Q9SVC5 | 2e-36 | DOF35_ARATH; Dof zinc finger protein DOF3.5 | ||||
TrEMBL | A0A2I0W5W7 | 5e-54 | A0A2I0W5W7_9ASPA; Dof zinc finger protein DOF3.5 | ||||
STRING | XP_008779883.1 | 6e-40 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2659 | 36 | 83 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52440.1 | 4e-38 | Dof family protein |