PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_01221
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 310aa    MW: 33869.6 Da    PI: 7.803
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_01221genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH278e-09141177443
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaei 43 
                 +h+ +Er RR++iN ++  L+el+P +   +++K+s ++i
  PEQU_01221 141 SHSLAERARREKINARMKLLQELVPGC---SKGKVSPVQI 177
                 8**************************...8999887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-13135214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.95E-8135199No hitNo description
PROSITE profilePS5088814.126137194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-12141212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-6141177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-6143200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
PRQAVELLHE LDPSSSRGFR LGDPKAVRLP LRCSPTFPSN AALIERATRF SVFANSEDSP  60
EASSAFPSNS DGDHSPNTKS DPPDSELKPQ RPVKRKESEK SSKKKGKSAS AAGDEGSPAN  120
PDGEKLPYVH VRARRGQATD SHSLAERARR EKINARMKLL QELVPGCSKG KVSPVQISGT  180
ALVLDEIINH VQLLQRQVEI LSMRLAAVNP RVDFTGLDNL LSAECGRVNA SGHAPGWVDG  240
NGVMRRNQHY DDQQIWHVDL EQQEETEQLS HHRHHHHRVL ISGSSSGSPP GTSLFGYDPS  300
ASGNPLFEFG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020682274.11e-159transcription factor bHLH48
SwissprotQ8VZ024e-58BH048_ARATH; Transcription factor bHLH48
TrEMBLA0A2I0ABA51e-130A0A2I0ABA5_9ASPA; Transcription factor bHLH48
STRINGXP_008782895.13e-96(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69322735
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42300.18e-59bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Li Y,Wang H,Li X,Liang G,Yu D
    Two DELLA-interacting proteins bHLH48 and bHLH60 regulate flowering under long-day conditions in Arabidopsis thaliana.
    J. Exp. Bot., 2017. 68(11): p. 2757-2767
    [PMID:28591805]