PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_01082

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bHLH

Protein Properties

Length: 479aa MW: 53681.5 Da PI: 9.0145

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_01082	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.2	3.9e-05	373	405	17	54
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ L++l+ + +K + a++L++A+eYIk L PEQU_01082 373 GDRVTALQQLVSPF-----GKTDTASVLQEAIEYIKFL 405 55666677777776.....8****************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.138	356	405	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.57E-11	366	423	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.41E-6	366	410	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.4E-8	367	416	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	0.0037	367	411	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence Send to blast
MHTEFCKSQL RNLAKSVLRR RRFNATDGRD GPVVPGVYRV RNMDLIGAEM ERNRGNWSKE 60 VASRPTFRRD FWALRCHVWA PGFSQKTEKT TLRHYRQTPK RQNCSGRCQL SLPFSIHVIP 120 IHSFYKKAKN LPPNLPIPYD TIETKQQIPI QRKRKPNTVM ADEFHGLSGS WWSSMRCSSV 180 KEPQDLCFGW AQSLAADGIA GCSFDNSPAS CVTFQGIPAM DSSCQLSISD LSPSSVDQWA 240 QSFIAEGSDE PYANLKDTSQ GFLTIDPSSS ESAMTNLPVL SPSGFSLLDN LLAFEARPHQ 300 QDNSGKNTSS DFCSLVEPLQ FMDAGFEEKS YLNKSELNSE ENTSSSNSSR SKKPRIATPS 360 PLPTFKVRKE KLGDRVTALQ QLVSPFGKTD TASVLQEAIE YIKFLHDQVR TLSSPYLRTG 420 SQINQQQNSE RSKDSEGRKQ QLRSRGLCLV PISSTFAVAC SNIPPIDFWT PPFGMFSYT

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence Send to blast

MHTEFCKSQL RNLAKSVLRR RRFNATDGRD GPVVPGVYRV RNMDLIGAEM ERNRGNWSKE  60
VASRPTFRRD FWALRCHVWA PGFSQKTEKT TLRHYRQTPK RQNCSGRCQL SLPFSIHVIP  120
IHSFYKKAKN LPPNLPIPYD TIETKQQIPI QRKRKPNTVM ADEFHGLSGS WWSSMRCSSV  180
KEPQDLCFGW AQSLAADGIA GCSFDNSPAS CVTFQGIPAM DSSCQLSISD LSPSSVDQWA  240
QSFIAEGSDE PYANLKDTSQ GFLTIDPSSS ESAMTNLPVL SPSGFSLLDN LLAFEARPHQ  300
QDNSGKNTSS DFCSLVEPLQ FMDAGFEEKS YLNKSELNSE ENTSSSNSSR SKKPRIATPS  360
PLPTFKVRKE KLGDRVTALQ QLVSPFGKTD TASVLQEAIE YIKFLHDQVR TLSSPYLRTG  420
SQINQQQNSE RSKDSEGRKQ QLRSRGLCLV PISSTFAVAC SNIPPIDFWT PPFGMFSYT

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020597506.1	0.0	transcription factor bHLH112-like isoform X2
TrEMBL	A0A2I0WML5	1e-146	A0A2I0WML5_9ASPA; Transcription factor bHLH112

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2970	34	64

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	2e-44	bHLH family protein