PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_00755
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family NAC
Protein Properties Length: 386aa    MW: 43580.9 Da    PI: 7.1331
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_00755genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.94.6e-54571821128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrFhPtdeel+ +yLk++++++++++ ++i+evdiyk++PwdLp k++ +++ew+fF++rd+ky++g r+nra++sgyWkatg+dk+++s ++e+
  PEQU_00755  57 LPPGFRFHPTDEELILHYLKNRASSSPCPA-SIIAEVDIYKFDPWDLPDKAAFGDREWFFFTPRDRKYPNGIRPNRAARSGYWKATGTDKPICS-GSEN 153
                 79****************************.89***************888899****************************************.99** PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 vg+kk Lvfykgr pkg+kt+W+mheyrl
  PEQU_00755 154 VGVKKALVFYKGRPPKGHKTNWIMHEYRL 182
                 ***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-6550214IPR003441NAC domain
PROSITE profilePS5100560.89957214IPR003441NAC domain
PfamPF023652.1E-2758182IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MPKDLALQNV DRPSSSLTSD NSNTNEISME LRIFLFHSYP ITSPPTLPEM STSSVHLPPG  60
FRFHPTDEEL ILHYLKNRAS SSPCPASIIA EVDIYKFDPW DLPDKAAFGD REWFFFTPRD  120
RKYPNGIRPN RAARSGYWKA TGTDKPICSG SENVGVKKAL VFYKGRPPKG HKTNWIMHEY  180
RLADANKNNS YKPIRLREHS MRLDDWVLCR IYKKSNHLSL TATDQEQEDP CGGEESCFPA  240
MQSQNHGMKL QKAPSLSELF EDYAPLLNLL DNQQELPRFD STSLLSHPLL SHSMINQSRE  300
GGPSGYFLPQ LSQVDSPVSL TGKRQRTADC TTEESGGALH SLKRQNDLNM FPNFNSGQFD  360
GSQYSLLSQP FLSQQALMNS NIGGFQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-71512179171Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence (developmental, light-induced and ABA-induced senescence) and regulates fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. Activates the expression of senescence and ABA associated genes including NCED1, ABCG40, CYP707A2, SAG113, SGR1 and PAO, by directly binding to their promoters. {ECO:0000269|PubMed:29760199}.
UniProtTranscription factor that binds to the promoter of ACO5, an ACC oxidase involved in ethylene biosynthesis. Mediates waterlogging-induced hyponastic leaf movement, and cell expansion in abaxial cells of the basal petiole region, by directly regulating the expression of ACO5 (PubMed:24363315). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000269|PubMed:24363315}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00333DAPTransfer from AT3G04070Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. Induced by abscisic acid (ABA). {ECO:0000269|PubMed:29760199}.
UniProtINDUCTION: By root flooding (PubMed:24363315). Induced by senescence (PubMed:24659488). {ECO:0000269|PubMed:24363315, ECO:0000269|PubMed:24659488}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020585542.10.0NAC transcription factor 29-like
SwissprotK4BNG74e-88NAP2_SOLLC; NAC domain-containing protein 2
SwissprotQ84TD62e-87NAC47_ARATH; NAC transcription factor 47
TrEMBLA0JBY80.0A0JBY8_9ASPA; NAC domain protein
STRINGXP_008782759.11e-127(Phoenix dactylifera)
STRINGXP_008793367.11e-127(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP123736123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.11e-79NAC domain containing protein 47
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Hofmann NR
    A NAC transcription factor for flooding: SHYG helps plants keep their leaves in the air.
    Plant Cell, 2013. 25(12): p. 4771
    [PMID:24363314]
  3. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  4. Ma X, et al.
    The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato.
    Plant Physiol., 2018. 177(3): p. 1286-1302
    [PMID:29760199]