PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_00717
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 605aa    MW: 68790.7 Da    PI: 5.27
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_00717genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.64.7e-13430476455
                 HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 +h   ErrRR+++N++f  Lr+l+P+ +      K++K +iL  ++eY+k+L+
  PEQU_00717 430 NHVLSERRRREKLNEKFLVLRSLVPSiS------KVDKTSILADTIEYLKELE 476
                 79999*********************66......****************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142159.5E-413167IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088816.691426475IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-18427490IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.6E-19429493IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.79E-12429473No hitNo description
PfamPF000101.6E-10430476IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.2E-15432481IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009957Biological Processepidermal cell fate specification
GO:0010091Biological Processtrichome branching
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    Send to blast
HFRKQLAACV RSIQWSYAIF WSLSASQEGL LVWNDGFYNG DIKTRKTTQA TECKADQMGL  60
QRSEQLRELY ESLSTVECNE QSTRPSASLS PEDLTEAEWY YLICMSFTFN LGQDLPGKVY  120
EHNEPVWLSN VQVAENRCFS RCLLAKTVVG LPFMDGVLEL GTSELVNPFL FKNLQITILY  180
ILTLLTGHIS KVLEDPGFVQ RIVNSFWEFQ DPVSSEQSTS SPPFVRKEDT VCTNLDHGVD  240
NSMLLENHPL ITENDSHVFP VDVDSFAPNK QSRNLMDDEV KNDPHCSLNS GECLSWSFAQ  300
NILSSPRGER IKGNIFDNLQ EDNHAKVGSF SAEGDGFHYA RTLSTILGNL KQQVSLPGIP  360
YENRFNKSSF KIWKRGSRVS KIFADIPQRM LKSILIDSKR MNGDHLVKLQ DENVAKNKTW  420
KAEADDANSN HVLSERRRRE KLNEKFLVLR SLVPSISKVD KTSILADTIE YLKELERRVE  480
ELESCREEAD PDMKARRKYP DIAERTSDNY GNNDLVNPKK PSSNKRKASE LDEAKDENLG  540
LLPKNGLVDI NITMVEKVVL IEMQCPWRDL LLLDIIEAMN NLHLDAQSVQ SSIDDGNLSI  600
TLRSK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4rqw_A8e-1121669178Transcription factor MYC3
4rqw_B8e-1121669178Transcription factor MYC3
4rs9_A8e-1121669178Transcription factor MYC3
4yz6_A8e-1121669178Transcription factor MYC3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1434439ERRRRE
2435440RRRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020589863.10.0transcription factor EGL1-like isoform X1
RefseqXP_020589871.10.0transcription factor EGL1-like isoform X1
RefseqXP_020589879.10.0transcription factor EGL1-like isoform X1
RefseqXP_020589888.10.0transcription factor EGL1-like isoform X1
TrEMBLA0A2I0WX500.0A0A2I0WX50_9ASPA; Transcription factor GLABRA 3
STRINGXP_008806796.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP93233109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41315.11e-116bHLH family protein