PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s981971g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family TALE
Protein Properties Length: 505aa    MW: 55882.4 Da    PI: 7.2775
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s981971g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.26.9e-092863231954
                        HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
           Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                        Fe   ++yp+  ++  LA+++gL+ +qV++WF N R +
  PDK_30s981971g001 286 FEHflHPYPTDVDKHILARQTGLSRSQVSNWFINARVR 323
                        664459******************************88 PP
2BELL112.22.8e-36150218472
               BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                        elq+++akLls+leeVd+rY++y+eq+++v+ssFeavag g+a+ Y +lA+ka+SrhFrcL+d i++qi
  PDK_30s981971g001 150 ELQRRRAKLLSMLEEVDRRYRKYCEQMRAVVSSFEAVAGKGAATFYSTLASKAMSRHFRCLRDGIVGQI 218
                        89*****************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.6E-5786216IPR006563POX domain
PfamPF075268.1E-4692214IPR006563POX domain
PROSITE profilePS5007112.034264327IPR001356Homeobox domain
SMARTSM003899.0E-9267331IPR001356Homeobox domain
CDDcd000861.95E-11267328No hitNo description
SuperFamilySSF466892.57E-17268334IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.8E-28270334IPR009057Homeodomain-like
PfamPF059207.5E-18284323IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0009506Cellular Componentplasmodesma
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MVTTETVAPA SPWQVDDSSL RSLFPCEETG QPNRGLSLSL FNPKPSDAIG VPPSCYQSDS  60
RDGLLSRAAS SHQQQIFMQE GRGFDSHQPF QLKNSKYLGP AKELLTEFCN LGGEISSSKR  120
SQKASQWEEG GPSSSSSSWH QPLNSMDPLE LQRRRAKLLS MLEEVDRRYR KYCEQMRAVV  180
SSFEAVAGKG AATFYSTLAS KAMSRHFRCL RDGIVGQIRA AEKAIGEKDA VAPGTTKGET  240
PRLKLLDQCL RQQKAFHQAG MLEDHPWRPQ RGLPERSVSI LRAWLFEHFL HPYPTDVDKH  300
ILARQTGLSR SQVSNWFINA RVRLWKPMVE EMYMEETKEQ NSQSSNATTG QQDDANPNPN  360
LNPGLDQKPA PVQLLNDSDS LSSIINSSHH SDQKNTMNAK ASRDHNPQHQ VPRTESFGVS  420
NLDFSYSGCG SRNLGSGVSL TLGLQQHSGG GMSLSFSPSS QHSLLFSGEH VDDGQQVQFA  480
ILDGEAQTVP YRNMMGAQLL HDLAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A2e-15273331563Homeobox protein Meis2
3k2a_B2e-15273331563Homeobox protein Meis2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008796900.10.0homeobox protein BEL1 homolog
SwissprotQ388971e-123BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBLA0A2H3YCZ20.0A0A2H3YCZ2_PHODC; homeobox protein BEL1 homolog
STRINGXP_008796900.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38143764
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.11e-112TALE family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]
  2. Lozano-Sotomayor P, et al.
    Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
    Plant J., 2016. 88(3): p. 437-451
    [PMID:27402171]