PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s981271g002 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | NAC | ||||||||
Protein Properties | Length: 131aa MW: 14840.8 Da PI: 7.3411 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 46.3 | 1.3e-14 | 5 | 111 | 9 | 128 |
NAM 9 PtdeelvveyLkkkvegkkleleevi.kevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkge 98 Pt++el + yL + ++g++l+ +i ++vd y++ P +Lp + f+++ + ++ r++r +sgyW + ++ +vl+ +++ PDK_30s981271g002 5 PTEQELRHLYLPAYMQGQELPSGGAIrSDVDPYSCIPDNLP--------GILFYTNCVHDQN---RRRRvNGSSGYWVPKARELSVLD-GRQ 84 *******************99988861577**********9........4679988877654...555535569**************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg k+t+ f p+ + t W m ey++ PDK_30s981271g002 85 VVGFKRTFQFC---LPNNTVTPWEMTEYTI 111 **********9...678889********86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 15.978 | 1 | 131 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.14E-19 | 4 | 116 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.1E-8 | 5 | 111 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence Send to blast |
MAGVPTEQEL RHLYLPAYMQ GQELPSGGAI RSDVDPYSCI PDNLPGILFY TNCVHDQNRR 60 RRVNGSSGYW VPKARELSVL DGRQVVGFKR TFQFCLPNNT VTPWEMTEYT IQSSKSVENQ 120 VNTVGIDARF L |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | XP_008813828.1 | 5e-95 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP29428 | 2 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27300.1 | 1e-07 | NTM1-like 8 |